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gwa1_scaffold_2445_3

Organism: GWA1_OD1_38_7

near complete RP 38 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 2726..3262

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_19_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 354
  • Evalue 8.70e-95
RNA polymerase sigma factor, sigma-70 family similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 52
  • Evalue 0.0

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Taxonomy

R_RIF_OD1_10_39_19 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGTTCCGCTCGGCTTAATTTATATGACTTCAAAACAAGAAACACAACTACAAGGAGTGCTCTCTGTGGCCCACCAAGATTTTGAGAGGGGGCTTAATTCACACGCATTTTTTAAAGTACACAACCATGCTACTGGTGAGAACTTGGTGCAAGATACTTTTATGAAAACTTGGATATACCTCGTAAAAGGAGGCAAAATTGAAATGATGAAAGCTTTCCTTTATCATATTTTGAATAATCTTATTATAGATGAATATAGAAAACACAAAACAACTTCTTTAGATGTTCTTCTTGAAAAAGGTTTCGAACCGAGCATAGATGATTCTAAAGGTCTTTTCAATATTTTAGATGGACGAGCCGCAATTCTCTTGATAGGAAAACTACCTTTAAAATTTCAAAAGATAATGCGTATGAAATATGTGCAAGACCTCTCACTCCAAGAGATGTCGCTTATCACGGGAGAGTCAAGAAATAGTATGGCCGTGCAAGTACACCGCGGACTTGCCAAACTTAAACTTTTGTATAATCACTCGTAA
PROTEIN sequence
Length: 179
MVPLGLIYMTSKQETQLQGVLSVAHQDFERGLNSHAFFKVHNHATGENLVQDTFMKTWIYLVKGGKIEMMKAFLYHILNNLIIDEYRKHKTTSLDVLLEKGFEPSIDDSKGLFNILDGRAAILLIGKLPLKFQKIMRMKYVQDLSLQEMSLITGESRNSMAVQVHRGLAKLKLLYNHS*