ggKbase home page

gwa1_scaffold_2445_17

Organism: GWA1_OD1_38_7

near complete RP 38 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 15510..18020

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_19_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 837.0
  • Bit_score: 1652
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 854.0
  • Bit_score: 847
  • Evalue 4.00e-243
DNA-directed RNA polymerase subunit beta similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 846
  • Evalue 4.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_10_39_19 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 2511
ATGGAAACTGTATTACCTAAAAAATATTTTAGTAAATTTAAAAAGCCACTTATCCAAATACCTGATTTGGCCAAAGATCAGGTGCATTCTTTTGAGTGGCTCATTGAGAAAGGTATAAAAGAAGTTTTTGATGAATTCACTGTGATCAATGATACTTCTGGTAAAAAATTCAAATTTGAGTTTTTAAGTTTTGAATTGGAAAAACCAAAATATGACGAGTACCACGCCAAGGAGAAAAAGATCTACTACGAAGCGCCACTCAAGGCCAGAGTCCGCCTGACCAACAAAACCATGGGTACAGAGAAAGAACAGGAAATCTTTATGGCAGATTTCCCAATGATGACTCCTCATGGCACATTCATTATAAGTGGCGTCGAGAGAGTGATCGTCCCACAACTTGCAAGATCATTTGGAGTATTTTTCACTAAGTTAGAATCAAAAGGAAAATCTCTTTTTGGAGTAAAGATAATACCAGCTCGCGGCGCTTGGATTGAAATCGAAACCGATGTTGATAAGGCTATCTATGTCCGTATTGATAGAAAAAGAAAGTTCCCCGTTACCTCACTTTTGCGAGCTTTTGGCGCTGAAACTGATTCGGAAATTTTTGATCTCTTCAAAGACAACCCAAATGCTAAAGAATATTTGGAAAAATCATTGGCCAAAGATCATGCCAAAACAGTAGAAGAATCTTACGTTGAAATATACAAAAGATTAAGAGATGGTGATTTGGCTACTGCTGAAAATGCCAAAGAATTTTTGAAAAATTTGTTTGATGTTGACAGATATGACCTTCAGAAAGTTGGTAGATTTAGATTTAATTCTAGATTCAATTTACCTACTTCCGGCAAGGGCTCTGATAGAAGGACTTTAAATCTAGAAGATCTGAGACTGGTGGTAAATCACATTATTCATTTAAATACCACCCCGGGATCTATTGAGGACGATATAGACCATTTAGGTAGTAGAAGAGTCAAGTATGTAGGCGAGCTTTTGCAACAAAAATTCCGTATCGGCATGGCTCAAATCAAACGAAATATGCAAAACAGGATGTCTACGGTGGACACCGATATGACTTTGCCTATTCAATTTATAACTCCAAAACCACTGCAAGCCCGACTCAAAGAATTTTTCACCACCAACCAGCTTTCCCAATTTATGGCCCAAGAAAATGCTTTGGCTGAGATTGAACATTTGCGAACACTTTCTGCTTTGGGACCGGGAGGACTTAACAGATCCAGAGCGGGTTATGAGGTCCGCGATGTCCACCCCTCACATTATGGCAGACTTTGCCCTATCCAAACCCCAGAAGGACCAAACATTGGTTTAATCCTTCACTTGGCCCTTTATGCTCGGATCAACGAATTTGGAATGATAGAAACTCCTTATGTAAAAGTTAAAGACGGCAAAGTAACTAACGAAATAGAATACTTGAATGCTTTAGAGGAAGAAAAATTTGCTATCGCTCATGCCGCCATAGAAATAGATGCCGAGGGACATATCAAACCAAAAATGGTAGAGGCTCGTTTAAATAACAAACCCGACTTGGTTCCAAAAGCAAAAATTGATTATATGGATGTCGCCACCAATCAAGCCTTTTCGGTAGCTACTTCACTTATACCATTTCTAGACCACGATGATGCTGGTCGCGCCCTCATGGGATCAAGTATGCAGAAACAAGCAACTCCATGCGTTGAACCAGAAGCGCCTTTAGTAGCCACTGGCATTGAAGGTCCTGCTATGAGAGACACTGGTAGATTAATTATTGCTTCAAATGCTGGAATAGTTTCAAAAGTTGATGGATCCTCTATAGAAATCACTGACGACAAAGGTAAAAAAATATCTTACCGACTTATCAATTTTGCCAAAACTAACAGTTCCACTTGTTTCCACCAAAGACCTATAGTAAACGTGGGAAGTCATGTAAAAAAAGGAGAAGTCCTCGCCGATACTTTAACTTCTGTGCAAGGAGAGATGGCTTTGGGTCAAAATATCTTAATTGCCTTTTTATCTTGGTCTGGAGCAAACTATGAAGATGCTATCATTCTTTCAGAAAGACTTGTAAAAGAAAATAAATTTACCACCATCCACATTGACGAAGTGGTAGTAAATGTCCGAGATACCAAATTGGGACCAGAAATCACCACTTGTGATATTCCTAATGTTGGGGAAAATAAATTGAAAAATCTGGCAGAAGACGGAGTAGTAAGAGTGGGAGCAGAAGTAAATCCGGGAGACATTTTGGTTGGTAAAATCACCCCCAAAGGAGAAAGCCAGCTCACCCCAGAAGAAAGACTACTCAGATCTCTTTTTGGAGAAAAATCCAGAGATGTTAAAGATACTTCTAAAAGAGTGGGTGGTGGCAAAAAGGGGAGGATAATAAATGTTCAAGTATTCTCCAGAGAAAAAGGCGACAAACTAGAATCAGGTATTATAAAAAGAATTCATATAGAAATAGCTCAGGTAAGAAATGTTTCTGTTGGAGACAAGTTGGCGGGTAGACACGGCAACAAA
PROTEIN sequence
Length: 837
METVLPKKYFSKFKKPLIQIPDLAKDQVHSFEWLIEKGIKEVFDEFTVINDTSGKKFKFEFLSFELEKPKYDEYHAKEKKIYYEAPLKARVRLTNKTMGTEKEQEIFMADFPMMTPHGTFIISGVERVIVPQLARSFGVFFTKLESKGKSLFGVKIIPARGAWIEIETDVDKAIYVRIDRKRKFPVTSLLRAFGAETDSEIFDLFKDNPNAKEYLEKSLAKDHAKTVEESYVEIYKRLRDGDLATAENAKEFLKNLFDVDRYDLQKVGRFRFNSRFNLPTSGKGSDRRTLNLEDLRLVVNHIIHLNTTPGSIEDDIDHLGSRRVKYVGELLQQKFRIGMAQIKRNMQNRMSTVDTDMTLPIQFITPKPLQARLKEFFTTNQLSQFMAQENALAEIEHLRTLSALGPGGLNRSRAGYEVRDVHPSHYGRLCPIQTPEGPNIGLILHLALYARINEFGMIETPYVKVKDGKVTNEIEYLNALEEEKFAIAHAAIEIDAEGHIKPKMVEARLNNKPDLVPKAKIDYMDVATNQAFSVATSLIPFLDHDDAGRALMGSSMQKQATPCVEPEAPLVATGIEGPAMRDTGRLIIASNAGIVSKVDGSSIEITDDKGKKISYRLINFAKTNSSTCFHQRPIVNVGSHVKKGEVLADTLTSVQGEMALGQNILIAFLSWSGANYEDAIILSERLVKENKFTTIHIDEVVVNVRDTKLGPEITTCDIPNVGENKLKNLAEDGVVRVGAEVNPGDILVGKITPKGESQLTPEERLLRSLFGEKSRDVKDTSKRVGGGKKGRIINVQVFSREKGDKLESGIIKRIHIEIAQVRNVSVGDKLAGRHGNK