ggKbase home page

gwa1_scaffold_8540_3

Organism: GWA1_OD1_38_7

near complete RP 38 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(2990..3595)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway, pseudopilin {ECO:0000313|EMBL:KKQ76892.1}; TaxID=1618783 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_38_7.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 201.0
  • Bit_score: 408
  • Evalue 7.50e-111
Type II secretory pathway, pseudopilin similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 53
  • Evalue 8.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWA1_38_7 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAAATACGAAATACGAAATACTAAATACGATTTTAAAAAAGGCTTGACCCGCGGAGCTAGAGCGAGACAGGGGTTTACAGTACTTGAATCTATTGTCGCCATATTTGTATTATCACTTTCTATATCCGGAGCATTTTCTGCAGTGAGACAGAGTTTAAATCAATCAATTCTTTCTAAAGAAGAAGTAAAGGCATTTTATTTGGCGCAAGAGGTAGTAGAAATAATAAGGAATAAGAGAGATACCAATCAACTCGCTCGTATAAATGATGGAACTACTGGTTGGCTTGATGTTATAACTGGTAATGCAACAGACTACTGTTATTTTGGAAAGGTGTGTAAAATAGATATTTCTAATTACGATTTTGTTTCTTTGGGATCCACTTACTGTGGTAATTCTTGGGATAGTTGTCCTATATTGCGTCAAAACCAAGATGATTTTAGGTATGGTTACTATGCTGATTGGGTAGCAACAAATTTCAAGAGAGAAATTATGTTTGAATCAATAAATGCAGATGAGGTCGCTGTTATTGTCAGGATAACGTGGACAAAAGGTATAACCACAAAGGAGTTTAAAATAAAAACCCATCTATTTAATAGGATATGA
PROTEIN sequence
Length: 202
MKYEIRNTKYDFKKGLTRGARARQGFTVLESIVAIFVLSLSISGAFSAVRQSLNQSILSKEEVKAFYLAQEVVEIIRNKRDTNQLARINDGTTGWLDVITGNATDYCYFGKVCKIDISNYDFVSLGSTYCGNSWDSCPILRQNQDDFRYGYYADWVATNFKREIMFESINADEVAVIVRITWTKGITTKEFKIKTHLFNRI*