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gwf2_scaffold_5260_11

Organism: GWF2_OD1_39_8_partial

partial RP 34 / 55 BSCG 33 / 51 MC: 1 ASCG 8 / 38
Location: 9213..11030

Top 3 Functional Annotations

Value Algorithm Source
ribocuclease J; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 605.0
  • Bit_score: 1201
  • Evalue 0.0
ribocuclease J KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 560.0
  • Bit_score: 445
  • Evalue 2.00e-122
RNA-metabolising metallo-beta-lactamase similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 456
  • Evalue 1.00e+00

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Taxonomy

R_RIF_OD1_10_39_10 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1818
ATGAACCCAATAACACAAAACACAACTAACGTAAGACATGGAAGTAGTTCTCGAGACAGGTATCCTAGACGATCATTTTCTCGAGAGAGAATTCCTAGAGTCATGCCAAAAAAAGTAAGTGACGTAATTCCACCGATAGGTGGTAATATCCGTATTATACCTCTTGGTGGAGTGGAAGAAGTCGGCAAAAACATGACTGTTGTAGAGTACGGTGAGGACATTATTATTATAGACGTGGGATTTCAGTTCAAAGATGGTGATACACCGGGAGTAGATTACATACTACCTAATACAAAATATCTGGAGGACAGGAAGGACAAAATCCGTGGAGTTATCATCACTCACGGTCACTTGGACCACATTGGTGGTATTCCCTACATTATGGACCGCATAGGCAATCCACCTATTTACACAAGACTTCTGACCAGTATCCTCATAAACAAACGTCAAGAAGAATTTCCACATCTTCCGACACTTGATATGAAAATTGTGGAGAAAGAAGAAACTATTACGCTTGGAAAATTAAAAGTGGAATTTTTTACTGTAACCCACACTATCCCTGACGCCATGGGTGTTATGATTCATACACCGTATGGACTTGTTGTAACTCCGGGAGATGTCAAGCTTGACCATTTTGATGGTGTTCCGACAGATGCCGAAGTGACAGAGTACAATCGTTTCAAAAATCAAAAAGTTCTCCTGCTTATGCTTGAATCAACCAACGTGGACAACCCGGGCTTCTCTACTCCAGAGCGTGTAGTCCATGAAAACTTGGACGAAATTATAAAAAGTATTCATGGCCGTTTAGTTATCGGAACATTTGCTTCACTTCTTGAGCGTGTTATAAAAATCATTGAGATTGCCGAAAAATACGGCAAGAAAATTGTCATCGAAGGTCGTAGTATGAAAAGTAATGTAGAGATAGTTCGCCATATCGGCATGCTCAAAGTAAAACCGGATACCATTATTTCCTCCGAGGACATGGTTAACTACCCTCCTGACCGCATCGTCGTTTTGGCAACAGGTGCCCAAGGAGACGAATTTGCCGCCCTGATGCGTATGTCAAACAAAACACACAAATATTTCAAGATTACCCCGAGAGACACGGTACTACTGTCCTCATCTATTATTCCCGGAAATGAAAAAGCTGTCCAAAAACTGAAAGACAACTTGTCTAGACAAGGAGCGAAAATAATTCATTATCGGTCTAGTGATGTCTATGTTCATTCCTCGGGACATGGTAATCGCGGAGAGCTGGAATGGCTACATCGCAAAATTGCCCCAAAATTTTTTATGCCTATGCATGGTAGCCACTACATGCTTCGTATGCACGAAGACCTTGTAAAGTCAGCAGTTGGTATGCCCGTAGAAAGTGTCATCGTCCCTGACAACGGTACTATATTGGAAATTCAAAACCAAGGAAATAATTTTGTTCGACTGAAAGAAACTGCCCCAGACGAAGTTGTCACTGTTGACGGTTTCTCTGTCGGCAATGTCCAAGAGATGGTTATACGCGACCGTAAAATGCTTGCCCAAGACGGTATTTTCCTCATCGTGGTTTCCATCAACACCAGGACAGGCAAACTGAAAAAGTCTCCGGATATTATCTCTCGCGGTTTCGTCTACTTGCGCGAGTCCCAAGACCTGCTTTCTGCCGCCCGTATGGTCATAAAGAAAAGTGTGGAAAATACCACACACAACATGAACCCAATCAACTTTGACTTCGTCAAAAGTAACCTAGCCGACGACGTCGGCCGATTCCTCTTCCAAAAAACCGCCAAAAAACCAATTGTCATTCCGGTGATACTAGGTGTGTAA
PROTEIN sequence
Length: 606
MNPITQNTTNVRHGSSSRDRYPRRSFSRERIPRVMPKKVSDVIPPIGGNIRIIPLGGVEEVGKNMTVVEYGEDIIIIDVGFQFKDGDTPGVDYILPNTKYLEDRKDKIRGVIITHGHLDHIGGIPYIMDRIGNPPIYTRLLTSILINKRQEEFPHLPTLDMKIVEKEETITLGKLKVEFFTVTHTIPDAMGVMIHTPYGLVVTPGDVKLDHFDGVPTDAEVTEYNRFKNQKVLLLMLESTNVDNPGFSTPERVVHENLDEIIKSIHGRLVIGTFASLLERVIKIIEIAEKYGKKIVIEGRSMKSNVEIVRHIGMLKVKPDTIISSEDMVNYPPDRIVVLATGAQGDEFAALMRMSNKTHKYFKITPRDTVLLSSSIIPGNEKAVQKLKDNLSRQGAKIIHYRSSDVYVHSSGHGNRGELEWLHRKIAPKFFMPMHGSHYMLRMHEDLVKSAVGMPVESVIVPDNGTILEIQNQGNNFVRLKETAPDEVVTVDGFSVGNVQEMVIRDRKMLAQDGIFLIVVSINTRTGKLKKSPDIISRGFVYLRESQDLLSAARMVIKKSVENTTHNMNPINFDFVKSNLADDVGRFLFQKTAKKPIVIPVILGV*