ggKbase home page

gwf2_scaffold_9412_12

Organism: GWF2_OD1-rel_44_7_partial

partial RP 30 / 55 MC: 1 BSCG 32 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: 12342..12920

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKT76212.1}; TaxID=1618970 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_7.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 393
  • Evalue 2.40e-106
RNA polymerase sigma factor SigW KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 175.0
  • Bit_score: 131
  • Evalue 2.60e-28
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 131
  • Evalue 3.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWF2_44_7 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCCGGAATTAACTAACTTAACTACTGATGAAGCAATTGTTCGTCAGGTCCAACTGGGAGATAGCGAAGCATTCGGTATTTTGGTTAAGCGATATGAGATAAAAATTTTACATTATGCCAGAAAGTTTCTTTTTAACTATACGGATATTGAGGATTTAGCGCAGGATGTTTTTATTAAGGCTTATAATAATATTCAAAGTTTTGACGCTTCAAGAAAATTTTCCGCCTGGATTTATCGTATTGCCCATAACGAATTTATTAACGCGATTAAAAAAAAAGGCAGAGAACCAGTTTCTTATTTTGATGTGGATGTTTTATGGCCGCGTCTTGTTTCGCGCGAGAAAGCCGATCATCGGGCCAATGAGCAGGAACTTAGAAAAATGCTTGATTATTGCCTTAATGAATTAGACCTAAAATATCGCGAGCCGTTAATTCTTTATTACTTAGAAGAGCTGGATTATCAGGAAATTGCCGATATTTTGCATATCCCTGTTTCAACGGTTGGTGTCAGGTTGCGGCGGGGAAGGGAAAAAATGAAATGGTTTTGCCAAAAATCAGGTTATCATTATGAACAATAA
PROTEIN sequence
Length: 193
MPELTNLTTDEAIVRQVQLGDSEAFGILVKRYEIKILHYARKFLFNYTDIEDLAQDVFIKAYNNIQSFDASRKFSAWIYRIAHNEFINAIKKKGREPVSYFDVDVLWPRLVSREKADHRANEQELRKMLDYCLNELDLKYREPLILYYLEELDYQEIADILHIPVSTVGVRLRRGREKMKWFCQKSGYHYEQ*