ggKbase home page

gwf1_scaffold_13233_3

Organism: GWF1_WS6_35_23_partial

partial RP 19 / 55 BSCG 24 / 51 MC: 2 ASCG 2 / 38 MC: 1
Location: comp(2182..2979)

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:KKP74728.1}; TaxID=1619097 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_35_23.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 265.0
  • Bit_score: 528
  • Evalue 5.00e-147
RsmD family RNA methyltransferase KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 186.0
  • Bit_score: 107
  • Evalue 7.20e-21
RNA methyltransferase, RsmD family similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 106
  • Evalue 8.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF1_WS6_35_23_partial → WS6 → Bacteria

Sequences

DNA sequence
Length: 798
ATGAGTTTAAAAATAGAATCATTCAAAAAATTAAGAAAAGACAAAAGGAAATGGAAAGTAGACACTCCAGAAGAATTTGAGGAGAGAGAAGATAGCTTCCTTAAAAAACGCTTGATGAGTAAAGAACCAACCATTGATACCTTTGTTAGAATATCTGGAGGAAAAGCAAAAAACTTCAAACTTGAAATCCCAAAAACGACAAGACCTCTTACGGACAGAATGAAAATAAAAATCTTTGACATCCTAAGAGAAGACATCGTTAAGAAAGATATCCTTGACCTCTATGCAGGAGCAGGATCTTTCGGACTAGAAGCACTCTCAAGAGGAGCTAAATCTGCTACATTTGTAGATGCATCTAGAAATGCATACTTTGTACTTCAAAAGAATATCGCACATACTGGATACCTACCAGAGACAGAAATAATCAAATCAAAAACAGAGGATTATCTTTTCAAGCAAACAAATCAAAAGAAATTACCAAAGTTTGACATCATTTTCGTGGACCCTCCATACAAACTGTTCAATACAAAAAATGTTTTCAAAATGGAGAGAGTTATGAACATGGCAGCACTCCTAATTACCGGTATACAAAATCCAAAAACAAATCATTTTAAAGGAGCCCTAATAGTTAAACATCCACGAAGATATCCGATTGAGAAATTAAATATAGAATTAGAAAAATGTATAACAAAACAGGTCTGTACAAAGAAAAAATCTGTAAAACAGTTTTTACAACACAACTCTTTTTTTAATGAGGCTTTTTCCCTTAAATATAACCTTTTAGATTTAAATATATGA
PROTEIN sequence
Length: 266
MSLKIESFKKLRKDKRKWKVDTPEEFEEREDSFLKKRLMSKEPTIDTFVRISGGKAKNFKLEIPKTTRPLTDRMKIKIFDILREDIVKKDILDLYAGAGSFGLEALSRGAKSATFVDASRNAYFVLQKNIAHTGYLPETEIIKSKTEDYLFKQTNQKKLPKFDIIFVDPPYKLFNTKNVFKMERVMNMAALLITGIQNPKTNHFKGALIVKHPRRYPIEKLNIELEKCITKQVCTKKKSVKQFLQHNSFFNEAFSLKYNLLDLNI*