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gwe2_scaffold_3960_8

Organism: GWE2_CPR3_35_7

partial RP 40 / 55 BSCG 39 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(5600..6172)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKP85670.1}; TaxID=1618349 species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWE2_35_7.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 381
  • Evalue 5.40e-103
RNA polymerase sigma-E factor KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 185.0
  • Bit_score: 119
  • Evalue 1.00e-24
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 139
  • Evalue 1.00e+00

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Taxonomy

GWE2_CPR3_35_7 → CPR3 → Bacteria

Sequences

DNA sequence
Length: 573
ATGAATACAAAGAGTCGAGAATATAAAAATTTGTCCGACGAAGAGATTGTGAAATTGGTTATTTCCAAAGATCATAATCTCTATGAATTTTTGGTTCGTCGTTATCAGAAAAAATTGCTAAGTTACGTGGGATATTATATTCCTGATTACGACAAAGCGGCGGATGTGGTACAGGATGTTTTTATTAAGAGCTATATTAATCTACAGGGATTTAATAGTCATCTTAAATTCTCAAGTTGGTTGTATCGTATTGCCCACAATGAATCAATTAACGCCATAAAAAAGTATCATCGGGAAGTTTCACTGGAAGGTAATGAAAATTTTGAAGCTGTCTTTTTGGATCATACAAAAAACATTGAAGAAATTTTTGAAAAAAAAGAGTTACGCGAAAATTTGAAAAGAGCTGTGCATAGATTACCTTTTAAATATGAAGAGGTAATCATTTTGTATTATTTTGAAGAGAAGTCTTATGAAGAGATTAGCGATGTTTTAAGGATTTCCTTAGGGGCAGTGGGAACCAGAATTAACAGAGCTAAAAAAATGTTAGTTGAATTATATACTCAACATCCTTAA
PROTEIN sequence
Length: 191
MNTKSREYKNLSDEEIVKLVISKDHNLYEFLVRRYQKKLLSYVGYYIPDYDKAADVVQDVFIKSYINLQGFNSHLKFSSWLYRIAHNESINAIKKYHREVSLEGNENFEAVFLDHTKNIEEIFEKKELRENLKRAVHRLPFKYEEVIILYYFEEKSYEEISDVLRISLGAVGTRINRAKKMLVELYTQHP*