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gwe2_scaffold_3000_1

Organism: GWE2_OP11_38_30

near complete RP 41 / 55 BSCG 45 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2..517

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA1_FULL_OP11_Shapirobacteria_39_17_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 340
  • Evalue 1.60e-90
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 170.0
  • Bit_score: 130
  • Evalue 5.10e-28
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 136
  • Evalue 8.00e+00

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Taxonomy

RIFOXYA1_FULL_OP11_Shapirobacteria_39_17_curated → Shapirobacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 516
GACAGTAATTATTATTATTGCCTTATGTCACGTTACGAAAAACAACTGGCCGCCTATGTCCACCATCTGACTTTTTTATCTCAATCAGATATCGACGATATTATTCAAAATTCTTTTGTCAAGGCTTATCAAAACCTAAATGATTTTGATTTTGACTTTAAATTTTCTTCCTGGATATATCGTATCGTCCACAATCAATCCGTCAACTTCCTCAAAAAATCAAAAAAGACCCAGACCTTAAACATCGATGATGATTATAGTGAAATTACCAATTGGTTAGTTAGTGACACCGACATCGAAAAACAAACTCAGGATTCCCAATTTCAGGACTACATCCGGTTGATCTTAGCTCAACTTAAACCGGAATATCAACAGGTTCTTGTCTTAAAATTCTTACAGGACAAAGATTATAAAGAAATTAGTCACATTTTACAAAAGCCCATGGGTACCGTCGCTACCCTTATTAATCGGGCCAAAAAACAATTTAAAACAATCTATGACCAAAACCAGTATTAG
PROTEIN sequence
Length: 172
DSNYYYCLMSRYEKQLAAYVHHLTFLSQSDIDDIIQNSFVKAYQNLNDFDFDFKFSSWIYRIVHNQSVNFLKKSKKTQTLNIDDDYSEITNWLVSDTDIEKQTQDSQFQDYIRLILAQLKPEYQQVLVLKFLQDKDYKEISHILQKPMGTVATLINRAKKQFKTIYDQNQY*