ggKbase home page

gwe2_scaffold_109_89

Organism: GWE2_OD1_31_40

near complete RP 46 / 55 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 88300..88860

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKP24981.1}; TaxID=1618771 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_30_133.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 365
  • Evalue 3.90e-98
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 182.0
  • Bit_score: 106
  • Evalue 6.60e-21
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 109
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_OD1_RAAC4-rel_30_133 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGCAGGCAGTTGAAACCGATGAAGAAATAATTACTAGATACAAGAATGGAGAAGAAGAACTTTTCAAGATGCTTATTGAAAGATATTCTTCTTCTCTTTTTAATTTTGCTATTTATCTTACAAATTTAAATTATGCACCAGATTTAGTACAAGAAGTCTTTATAAAAGTTTGGAAAAATTTGAATAAATTTAATGAAGAAAAGGCAAGTTTTAAAACTTGGATTTTTACTATAGCAAAAAATACTGCCACAGATTTTCTAAGAAAAAAGAAAAGTTTATTGTTTTCTGATATAGAGACAACTGAAGAAGACAATAGCTTTGAAGAGAATATATTGGATGAAAATTTATTACAGGATGAAGCATTACAAAAATTACAAGATATTGATCTTTTGAATGAATTATTAGCAAAACTTGATATAAATTATAGGACTATTCTTTTATTACATTATCAGGAAGATATGACTTTTGAAGAAATAGGAAAAATTTTGAAAAAACCTCTAAACACAGTGAAGAGCCAACATCGTCGTGCAATTCTTGATTTAAGAAAATTGCTATCTTGA
PROTEIN sequence
Length: 187
MQAVETDEEIITRYKNGEEELFKMLIERYSSSLFNFAIYLTNLNYAPDLVQEVFIKVWKNLNKFNEEKASFKTWIFTIAKNTATDFLRKKKSLLFSDIETTEEDNSFEENILDENLLQDEALQKLQDIDLLNELLAKLDINYRTILLLHYQEDMTFEEIGKILKKPLNTVKSQHRRAILDLRKLLS*