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gwc1_scaffold_189_5

Organism: GWC1_OD1_38_17

near complete RP 42 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(2888..4126)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKQ59618.1}; Flags: Fragment;; TaxID=1618936 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_38_16.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 412.0
  • Bit_score: 790
  • Evalue 1.40e-225
RNA polymerase sigma factor RpoD KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 364.0
  • Bit_score: 401
  • Evalue 2.90e-109
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 401
  • Evalue 3.00e+00

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Taxonomy

Parcubacteria bacterium GW2011_GWD1_38_16 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGCCTAAAAAATTAAAAAAAGTCCGCCGGCGCAGATTCAAAAAGTCCGCCAGAACCGTTAAAAAATCAATCAAAAAGAAAACAGCGAAAAAGAGGAAGAAGCCGTCTCGCAGAAAAGCAAAAATAATTGTTCCTATGCAACTTTCCAAAAAGGAACAGGCAGCATATGAATCCGCAATCGAGCAATTGGTAACTCGCGGCAGACAGCGCGGGTTCGTGACTTTTTCGGAAATAATTCAATTATTGCCGCAGATTGAGCGAAATATCGCTCTTCTTGAAGATTTATATTCAAAAATTGAGGCAGAAAATATCACTTTGCAGGAAGCAAAAGAATTATTGGAATTGGAAACTGGAAAAGAAACAGAGGCTTCCGAGGCTAAGCGCGCCAAAGCGCTGGATGTTGATCAATTGTCGCAAGATTCTGTGCAGATGTATTTGCGCGAGATCGGTAAAATCTCTCTGATTAACGCCGAGGAGGAAAGGGAGCTGGCAAAACGAATTGAAGGCGGCGATGAAGAGGCGCGAAAGAAAATGACGCAGGCGAATTTGCGACTCGTTGTGTCTATTGCCAAAAGGTATATCGGCCGCAGTCCGCATTTGACTTTGCTAGATTTGATTCAGGAAGGGAATATAGGCCTCTTTAAGGCAGTGGAAAAATTTGATTATCGCAGAGGATTTAAATTCTCCACATATGCTACCTGGTGGATTAGACAGGCCATCACCAGGGCTCTCGCCGATCAAGCGCGCACTATTCGCATACCCGTGCATATGGTGGAGACGATTTCTAAATATACGCAGATTAAAAGAAGAATGCTTCAGGATTTGGGCCGCGAGCCATTGTCTGAAGAAGTGGCAGCGGAAATGGGCATTGAGGTGGAGAAAGTTCGCCATATTCAAAAAATCGCTCAAGAGACGATTTCCCTCGAAACACCGGTGGGAGATGATGATGAAGATAGCGCGATTGGTGAATTTATTGAGGATGAAAAAGAGATTATGCCTCATCAGGCCGCTGCGCGGCATATTTTAAAAGATCAGATTGGCGGCATTTTGAACGATCTTTCTCCGCGCGAGCAAAAGATTTTGAGATTGCGTTTTGGTTTGGATGATGGAGTGACCCATACTTTGGAAGAAGTTGGCAAGGAATTCGGCGTAACTCGCGAGAGAATCCGCCAGATTGAAGCAAAAGCTTTAATGAAGATTCGTCAACATAGTCATTTGAAAAAATTGGAAGGATACTAA
PROTEIN sequence
Length: 413
MPKKLKKVRRRRFKKSARTVKKSIKKKTAKKRKKPSRRKAKIIVPMQLSKKEQAAYESAIEQLVTRGRQRGFVTFSEIIQLLPQIERNIALLEDLYSKIEAENITLQEAKELLELETGKETEASEAKRAKALDVDQLSQDSVQMYLREIGKISLINAEEERELAKRIEGGDEEARKKMTQANLRLVVSIAKRYIGRSPHLTLLDLIQEGNIGLFKAVEKFDYRRGFKFSTYATWWIRQAITRALADQARTIRIPVHMVETISKYTQIKRRMLQDLGREPLSEEVAAEMGIEVEKVRHIQKIAQETISLETPVGDDDEDSAIGEFIEDEKEIMPHQAAARHILKDQIGGILNDLSPREQKILRLRFGLDDGVTHTLEEVGKEFGVTRERIRQIEAKALMKIRQHSHLKKLEGY*