ggKbase home page

gwc1_scaffold_6370_3

Organism: GWC1_OD1_35_8_partial

partial RP 26 / 55 BSCG 27 / 51 ASCG 7 / 38
Location: 1976..3193

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system F domain protein; K02653 type IV pilus assembly protein PilC Tax=RIFOXYC2_FULL_OD1_Nomurabacteria_36_19_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 405.0
  • Bit_score: 768
  • Evalue 4.40e-219
type II secretion system protein F KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 347.0
  • Bit_score: 245
  • Evalue 3.40e-62
Type II secretion system F domain protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 240
  • Evalue 6.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC2_FULL_OD1_Nomurabacteria_36_19_curated → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGCTTTTTTTATACAAAGCAAAATTAAAAGAGGGTGGAATAATTGAAGGCGTTCAATATGCAAAAGACCGTCTATCTCTTGCTCATGACTTACGGGTTATGGGGAATATTCCTTTGTCTATTAGAGAAAAAGATGAAAGCTTGATGGAAAAAATATCAGGGCTTTTGAATATTTTCTCTAAAGTTAAAGTTGATGAACAAATTGTTTTAACAAAAAATTTAAGTGGAATGCTGAAAGCGGGACTTTCGCTCTATCGAGCATTGTCGGTTTTAAAAAAGCAGACAAAAAATCCTAAACTTGATAATATTTTAACTTCTCTTTCTGGTGAAATAAATTCCGGTGGTACTTTGTCTTCTGGATTTTTAAAATTTCCTGAAGTTTTTTCAAAACTTTTCATATCAATGACTCGAGCTGGTGAGGAGTCGGGGAATCTGGCTGGAGCGCTTTCTGATATAGGGGTGAGTTTGGAAAAATCACATGCTTTGAATAAAAAAATACGCGGAGCGCTTATTTATCCCGGGGTTATTTTATCTGCAATGGTTGTAATTGGGATTTTGATGTTTGCTTTTGTGGTGCCGACCTTGGCGGATACTTTTAAATCTCTCGGTGTTACTCTGCCTTTTTCCACTCAAGTTTTGATTTTCTTTGGAAATTTTTTCTCAAACCATTTGATATTAACTTTCTTAATTTTAATCGGTCTTGGTGTCGGTCTGTATTTATTTTTTACAGCTAAATTCATGATTAGATATATTGATTTTGTAATCATAAAGCTTCCAGTTATTGGGGATTTGGTAAAAGAATTAAATACTGCCCGCACTGCTCGCACTATGTCTTCACTTTTGCTTGCAGGAGTTTCTATTATTCGAGCGGTAGAAATTACTGAGGAAATAGTTCAAAATATTTATTATAAAAAAATTTTAAATGAAGCTAAAATATCAGTAGAAAAAGGAGCCCCGTTTTCTGAAGCTTTTTGTGAACATGAAGATTTATATCCGGTAATGATGTCGGAAATGGTTCAAGTAGGAGAAGAGACAGGAAAACTTTCAGATATGTTACTAGAAGTTGCTTTATTTTATGAAGGAGAAATTGAAAATAAAACTAAAAATCTTTCTACTATTATTGAGCCGGTTTTAATGATTTTTATTGGCGTGGCAGTTGGCTTTTTTGCAATTTCCATGATTTCACCACTTTATTCGATTTTAGGTAGTATAAATTAA
PROTEIN sequence
Length: 406
MLFLYKAKLKEGGIIEGVQYAKDRLSLAHDLRVMGNIPLSIREKDESLMEKISGLLNIFSKVKVDEQIVLTKNLSGMLKAGLSLYRALSVLKKQTKNPKLDNILTSLSGEINSGGTLSSGFLKFPEVFSKLFISMTRAGEESGNLAGALSDIGVSLEKSHALNKKIRGALIYPGVILSAMVVIGILMFAFVVPTLADTFKSLGVTLPFSTQVLIFFGNFFSNHLILTFLILIGLGVGLYLFFTAKFMIRYIDFVIIKLPVIGDLVKELNTARTARTMSSLLLAGVSIIRAVEITEEIVQNIYYKKILNEAKISVEKGAPFSEAFCEHEDLYPVMMSEMVQVGEETGKLSDMLLEVALFYEGEIENKTKNLSTIIEPVLMIFIGVAVGFFAISMISPLYSILGSIN*