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gwc1_scaffold_2509_18

Organism: GWC1_OD1-rel_45_13

near complete RP 37 / 55 BSCG 43 / 51 ASCG 11 / 38
Location: comp(12717..13112)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:KKT56194.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 260
  • Evalue 1.60e-66
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 128.0
  • Bit_score: 83
  • Evalue 5.50e-14
RNA polymerase sigma factor, sigma-70 family similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 85
  • Evalue 1.00e+00

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Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 396
TGGCGGAACTTAAAAAAATTTGATCAAAGTAAAAATTTTAAAACATGGATTTTCTCTATCGCTAAAAATTCGGCGATTGATTTTCTCCGAAAAAAGAAGGAAATTTTATTTTCCGAATTGGAAAACACTGATGGAGAAAATATGATTGCCGAAACGCTTGCTGACACAACACTTTTGCCGACGGAACTTTCAGAAAAAACAGAAAAATTTTACGGCCTTGCTTTAGCTGTAGGCAAACTTCCTCAAAAATACGGCGAGATAATCTCTTTAAGATACGGCGCTGACCTGTCTTTTTCTGAAATCGCGCGCTTTTTAGGCGAAAAATTAAACACTGTTAGAAGCCGCCATCGGCGCGGCATTTTGATGCTAAAATCCGTTTTTTTGCACCAAAAATAA
PROTEIN sequence
Length: 132
WRNLKKFDQSKNFKTWIFSIAKNSAIDFLRKKKEILFSELENTDGENMIAETLADTTLLPTELSEKTEKFYGLALAVGKLPQKYGEIISLRYGADLSFSEIARFLGEKLNTVRSRHRRGILMLKSVFLHQK*