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gwc1_scaffold_4619_3

Organism: GWC1_OD1_39_8_partial

partial RP 36 / 55 BSCG 39 / 51 ASCG 8 / 38 MC: 1
Location: comp(3021..3386)

Top 3 Functional Annotations

Value Algorithm Source
response regulator receiver protein; K02657 twitching motility two-component system response regulator PilG Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 238
  • Evalue 4.70e-60
Two component transcriptional regulator, winged helix KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 117.0
  • Bit_score: 97
  • Evalue 3.40e-18
DNA-binding response regulator; K11329 two-component system, OmpR family, response regulator RpaB alias=ACD15_C00020G00015,ACD15_75502.30289.16G0015,ACD15_75502.30289.16_15 id=8392 tax=ACD15 species=Synechococcus elongatus genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90
  • Identity: 42.1
  • Coverage: null
  • Bit_score: 110
  • Evalue 4.30e-22

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Taxonomy

RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGATTGTTGAAGATGATAGTTTCATGATTCAGCTCTATCATAATTTATTTAAGCTCGAAGGATTTGAAGTAGAGCTTGCTAAAGATGGTTTGGAAGCTTTGGATAAATTAAAAACTGCAGAAAAAGTGCCGGATATTATCTTGCTTGATATTATGATGCCACGTATGGATGGCTTCGAGTTTTTACGACAGAGAAATAAAGTAGATAAACTTAAAAATATTCCTGTCGTGGTCCTGTCTAATCTGTTTTCAGAAGAAGATCAAGAAAAGATTAAAAAATTAGGTGCTAAAGGTTTTATCACTAAAAGTGAACAAGATCCGAAGGAATTGGTGAAGAAAGTTAAAGAATATTTACCAAAGAGTTAA
PROTEIN sequence
Length: 122
MIVEDDSFMIQLYHNLFKLEGFEVELAKDGLEALDKLKTAEKVPDIILLDIMMPRMDGFEFLRQRNKVDKLKNIPVVVLSNLFSEEDQEKIKKLGAKGFITKSEQDPKELVKKVKEYLPKS*