ggKbase home page

gwc1_scaffold_4656_6

Organism: GWC1_OD1-rel_45_9

near complete RP 39 / 55 BSCG 43 / 51 ASCG 11 / 38 MC: 2
Location: comp(3665..5656)

Top 3 Functional Annotations

Value Algorithm Source
trcF; transcription-repair coupling factor (EC:3.6.1.-) KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 600.0
  • Bit_score: 483
  • Evalue 9.30e-134
Transcription-repair coupling factor {ECO:0000313|EMBL:KKT87724.1}; TaxID=1618877 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_10.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 663.0
  • Bit_score: 1295
  • Evalue 0.0
Transcription-repair coupling factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 485
  • Evalue 2.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWB1_45_10 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1992
ATGCTGGTTGAAAAAGATCTTTTAATTGTTGCGTTTGAGCCGTTTTTTCTTGAGCGGGACCAGTCTTGGCTGAAAAACAATTTTTCGCGCCTGAAAGCCGCTTCAAAAACCGAAAGCCGCTGGTCAAAAAGAGTTGTTTTTTTGGCGCTTGACTCAAAAATCAAGCTTTCCTGGCTTTTCCGCAAACTAGACGAACTGGGTTATGAAAAAGTTTCTTTGGCGGAGTCGCCGGGGGAGTTTGGGTTTTCCGGCGGCGTTCTTTCAATTTTTCCGCCGGGCGAGTTTTTGTTCCAGCTTGAGTTTTTGGGAGACTCTCTGGAAAAAATCAGTCAGATAAAGCAAAAGCCTTCTTTTGTCAGAAAAAGCCGCGACCCGGAAGTTTTTTCCGCTTCACCCGGGGATTATCTGGTGCATCTGGATCATGGTATCGGCATTTTTCGCGGTTTTATTGATAAGCCAAGCTCAAAAAATATTGTTAATGATTATCGCGAATTTGTTTCAGAATATCCCGGGCCGGGGTTTTTTGTGGTTGAGTACGCGCCGCCAAATCAAAACTTGGCTAAATCCGGCTCTTCTTTGCCTGACCGGCTGTTAGTGCCTTTGCACAAAGCCGATAAGCTTTCTTTTTATTCGGGTTTTGCCAAACCAACGATTCATCGTCTGGGCAGCCAGGTTTGGATGCTGACGAAAAAGAAGGCCAAGCAGGAAATTATCGCGTTTGCCAAAGAGCTTCTGGAGATTTACGCCAAGAGGGAGTTGAGCCGGCGCCCGGCTTATCCGGAAAACTTTGAAGCGGAAAGTATTTTGGCTTCAACTTTTCCTTTCACGGAAACGCCCGACCAGCTGAAAGCCATGAATGAAATTGACAAAGACCTTTCTTCTTCAAAACCAATGGACAGAATTCTTTGCGGCGACGTTGGCTTTGGCAAGACCGAGCTGGCTTTGCGGGCGGCCGTCAGAGTAGCGTTGTCGGGCAAGCAAGCAGTCTTGATTGCGCCGACAACGATTTTGGCGTACCAGCACTTTGAGCTTTTCCAGGAAAGGCTCAAAGATTTTCCCTTGGAGATCAGTTTTTTGTCTCGGCTGGTCAAGCCGATGATGATTAAAAAAGAAAAGCAAAAAATCCTTGAAGGCAGGACGGATATTATCATCGGCACCCACCGGCTTTTATCAAACGACCTAAAATTCAAAGACCTTGGGCTTCTGATTATTGACGAAGAACAGAGGTTTGGCGTCAAACACAAAGAAAAGCTGAAACAGCTGAAAAACAACATTGATATTCTTTCGCTGTCGGCGACGCCGATTCCGCGCACTTTGTATCTTGGGCTGGCTGGCTTGCGTTCCATGAGCCAGCTTTTGACGCCGCCGCCGGAAAAACTGCCGACCCAGACTTTTGTGATGCCGTTTTCCTGGGAAAAGCTCAAAGAGGCGATGGCGCTGGAAAAATCGCGTTCCGGCCAGATTTATCTGCTTTACAACCGCATCGCGGTTTTGGAAAAAATCAGACAAAAGCTGAAAAAAATCATGCCCGAAATGAAGATTTCAATCATTCACGGCCGCCAGCCGGAAAAAGAACTTTTGAAATCCATCACTGATTTTCGTTCGCAAAAAACCGATGTTTTGCTGGCAACGACAATCATTGAAAACGGCCTGGATATTTCCAATGCCAACACTTTGCTGGTGATTGACGCTTTCCGGCTCGGCTTGGCGGAAGCGCACCAGCTTCGCGGCCGGATTGGCAGAAAAGACCTGCCGTCTTTCGCTTATTTTTTTTACCATTCAAAAAGACTCGGCGACAAAGCCAGGGAAAGATTGAGGATTTTGAAAAAATACCAGCATCTTGGCGCGGGCATGGAGATTGCCAAAAAAGACCTGGAGCTGCGGGGGGCAGGCAATATTCTTGGCAAAGACCAGTCGGGTACAATCAACTCTGTCGGCTTGAATCTGTATCTGGAGATGCTGGCGCGCGTTTTGGAAGAACTGCGTGGATAA
PROTEIN sequence
Length: 664
MLVEKDLLIVAFEPFFLERDQSWLKNNFSRLKAASKTESRWSKRVVFLALDSKIKLSWLFRKLDELGYEKVSLAESPGEFGFSGGVLSIFPPGEFLFQLEFLGDSLEKISQIKQKPSFVRKSRDPEVFSASPGDYLVHLDHGIGIFRGFIDKPSSKNIVNDYREFVSEYPGPGFFVVEYAPPNQNLAKSGSSLPDRLLVPLHKADKLSFYSGFAKPTIHRLGSQVWMLTKKKAKQEIIAFAKELLEIYAKRELSRRPAYPENFEAESILASTFPFTETPDQLKAMNEIDKDLSSSKPMDRILCGDVGFGKTELALRAAVRVALSGKQAVLIAPTTILAYQHFELFQERLKDFPLEISFLSRLVKPMMIKKEKQKILEGRTDIIIGTHRLLSNDLKFKDLGLLIIDEEQRFGVKHKEKLKQLKNNIDILSLSATPIPRTLYLGLAGLRSMSQLLTPPPEKLPTQTFVMPFSWEKLKEAMALEKSRSGQIYLLYNRIAVLEKIRQKLKKIMPEMKISIIHGRQPEKELLKSITDFRSQKTDVLLATTIIENGLDISNANTLLVIDAFRLGLAEAHQLRGRIGRKDLPSFAYFFYHSKRLGDKARERLRILKKYQHLGAGMEIAKKDLELRGAGNILGKDQSGTINSVGLNLYLEMLARVLEELRG*