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gwc1_scaffold_6065_2

Organism: GWC1_OD1-rel_45_9

near complete RP 39 / 55 BSCG 43 / 51 ASCG 11 / 38 MC: 2
Location: 1268..2530

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily, RNA polymerase primary sigma factor {ECO:0000313|EMBL:KKU16317.1}; TaxID=1618916 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium G UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 420.0
  • Bit_score: 815
  • Evalue 4.20e-233
RpoD family RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 392.0
  • Bit_score: 361
  • Evalue 4.40e-97
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor alias=ACD1_C00053G00020,ACDUNK_406.23370.88G0020,ACDUNK_406.23370.88_20 id=17196 tax=ACD1 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90
  • Identity: 50.4
  • Coverage: null
  • Bit_score: 415
  • Evalue 2.20e-113

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Taxonomy

Parcubacteria bacterium GW2011_GWC1_45_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGGTCAAAATCAAACGAGCCGCCAAGACCGCCAAGCCAAAGCCGAAAAAAGCCAAAAAACTGGCTTCTTTTGTCAAACCTTTTCGGAAAAGAATCGGCAAACCAGTGAAAAAAAGAATTTCCAGAAAAATCAGAAACTCCCGGATGAAAAGGAAAAAATCTTTCGGCCAGACCCAGAAAGAAAAGCAGGCGATTTTTGAAAAAATGGGCGCGCTTTTGAAAAAAGGCAAATCCCGTGGCTTTATCACTGAAGAAGAAATCTTGAAAACCATTCCCGAGCTTGAATCAAACATTGAGATGCTTGAAGAGCTTTACGAAAGGCTGATGTCTTCAAACACCAGAATCTCCGGCCCGAAAAGCCTTTTGGATATCTCCGGCAACGAAGTTTCCGACGAAGAAATAAACAAAGCGATTTATTTTGACGATTTTGCCCAGCTGCCGGATTCAGTCCAGGTTTATCTGCAGGAAATCGGTCGGATTCCTTTACTGACTTCTGACCAGGAAAAAGAACTTGGCAAGCGTCTGGAAGCCGGCGACGACGAAGCCAGACAAAGATTGATTAACGCGAACCTGAGACTGGTGGTTTCCATCGCCAAAAAATACATTGGCCGGTCGTCCAATCTGTCTTTGCTTGATTTGATTCAAGAAGGCAACATCGGTCTGGCGCGCGCGGTTGACAAGTTTGATTACCGCCGCGGCTTCAAGTTTTCCACTTACGCCACCTGGTGGATCAGGCAGGCGATTACCCGGGCGATTGCCGATTACGGCCGGACCATCAGGATTCCGGTCCATATGGTGGAAACTCTGTCCAAGTTCAAAAAAGCCAAGCGCCGGCTTCAGATTGAACTCGGCCGCGAACCTTTGCCGGAAGAGATTGCCGTGGAGCTTGGCGAAGAAGTGGCAAAGATTCATCATTTGATAAAAATTGATCAGGACACGGTTTCTCTGGACCGGCCGATTGAAGAAGACGACCAAAGCACTTTAATCGGCGATTTCATCCAGGACGAATCAACCCCGGGACCGGATCAATTGACTTACGCCAAAATCACCAAAGACCATCTTTGGCAGATTTTGAGCGACCTGACTGACCGCGAGAAAAGAATCGTGGAGATGAGGTTCGGTTTGACGGATGGCGTGGTTCACACTCTGGAAGAGGTCGGCAAAGAGTTTGTCATCACCCGTGAAAGAGTCCGCCAGATTGAAGCCAAAGCTCTGGAAAAAATGCGCCAGCACGAAACCATGAAAAAAATAGAGGAGAACTGA
PROTEIN sequence
Length: 421
MVKIKRAAKTAKPKPKKAKKLASFVKPFRKRIGKPVKKRISRKIRNSRMKRKKSFGQTQKEKQAIFEKMGALLKKGKSRGFITEEEILKTIPELESNIEMLEELYERLMSSNTRISGPKSLLDISGNEVSDEEINKAIYFDDFAQLPDSVQVYLQEIGRIPLLTSDQEKELGKRLEAGDDEARQRLINANLRLVVSIAKKYIGRSSNLSLLDLIQEGNIGLARAVDKFDYRRGFKFSTYATWWIRQAITRAIADYGRTIRIPVHMVETLSKFKKAKRRLQIELGREPLPEEIAVELGEEVAKIHHLIKIDQDTVSLDRPIEEDDQSTLIGDFIQDESTPGPDQLTYAKITKDHLWQILSDLTDREKRIVEMRFGLTDGVVHTLEEVGKEFVITRERVRQIEAKALEKMRQHETMKKIEEN*