ggKbase home page

gwc1_scaffold_8833_4

Organism: GWC1_OD1_49_8

partial RP 27 / 55 MC: 1 BSCG 33 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1997..3160)

Top 3 Functional Annotations

Value Algorithm Source
Type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:KKU91283.1}; TaxID=1618660 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 387.0
  • Bit_score: 740
  • Evalue 1.20e-210
type II secretion system protein F KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 351.0
  • Bit_score: 224
  • Evalue 4.50e-56
Type IV fimbrial assembly protein PilC similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 231
  • Evalue 4.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_OD1_48_11 → Jorgensenbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGTCTTTATTCTCTTTTGGTAAGAGGGGTCAAATCCAAAACGTTCCAAAAAGCGAAGCGCTTGGCTCGGTGCGGGGCAAGAAGAATTCTTTCTGGGAATTTATGCGCCGCTTTTTGGGTTCTGTTCCGCTTCAGGAAAAGATCAATTTCGCCCGCCATCTTTCCGTTTCCATCAAAAGCGGCATGTCCTTGATTGACGCCTTGAAATTGATCCAGGGGCAGTCCAATTCCAAAAAATTCAGCCGCTTGATCGGAATAATCATCGAAGACGTAGAGAACGGCCAGTTTTTGGCCCAAAGCCTGGCGAAATTCCAGTATGTTTTCGGCGATCTGTTCGTGAATATGGTCAAAGTCGGGGAGACGAGCGGCAATCTTTCCCAAAGCCTGCTTTATCTGGCGGGCGAGATCAAGAAGCAGCGGGAGATCAACCGGCGTATCAAGGGCGCCCTGATTTACCCTCTGATTATTTTGATCGCGACGATCGGCGTCACCTTGTTTCTGACGCTTTTCATTTTCCCGAAAATCCTGCCGATTTTCGTCAGCCTCAAGATCCAGCTGCCTTTTACGACCCGGCTCGTGATCCAATTTTTGAGCTTTCTCCAATTTTACGGCCTTTATCTTTTGGGCGTTTTGGTCCTGCTCTTTATTTTGGGCAAGGGCTTGCTCGCCCTCCGGCGGGTCCATTTCTTTTTTGACCAGCTGATGGTGAGCTTGCCCTTTCTTTCGCAGGTCATCGTGAACATCACCATGACGAGTTTTACCCGATCTTTGAGCGTGCTTTTGAAGAGCGGCATGACCCTGGTCGACGCCTTGGACATAGCGAGAGGCACCTTCCACAATCTTTATTACCAGCGGGAAATAGAGCGGATGGCCGAGGGCGTGAAAAAAGGGGAATCGATGGCCCGCTATCTGGCCCAGAACCACCGGATTTTCCCGCCGATGCTCACGGGCATGATCCAGGTCGGCGAATCGACCGGCAACCTGGAAGAAAACCTGTCTTACTTGTCCGATTACTACGAAAGCGAAGTGGACGAAACCTTGAAAAACCTGACGACGGTTTTGGAGCCGGTCTTGCTCCTCACGATGGGGCTTTTGGTCGGCTTCATCGCTCTTTCCATCATTACGCCGATCTACCAGGTTACCCAGGGTTTGCAGATTAAGTAA
PROTEIN sequence
Length: 388
MSLFSFGKRGQIQNVPKSEALGSVRGKKNSFWEFMRRFLGSVPLQEKINFARHLSVSIKSGMSLIDALKLIQGQSNSKKFSRLIGIIIEDVENGQFLAQSLAKFQYVFGDLFVNMVKVGETSGNLSQSLLYLAGEIKKQREINRRIKGALIYPLIILIATIGVTLFLTLFIFPKILPIFVSLKIQLPFTTRLVIQFLSFLQFYGLYLLGVLVLLFILGKGLLALRRVHFFFDQLMVSLPFLSQVIVNITMTSFTRSLSVLLKSGMTLVDALDIARGTFHNLYYQREIERMAEGVKKGESMARYLAQNHRIFPPMLTGMIQVGESTGNLEENLSYLSDYYESEVDETLKNLTTVLEPVLLLTMGLLVGFIALSIITPIYQVTQGLQIK*