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gwc2_scaffold_1653_21

Organism: GWC2_OD1_35_35

near complete RP 40 / 55 BSCG 42 / 51 ASCG 10 / 38
Location: comp(13182..14411)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKP98395.1}; TaxID=1618728 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_36_15.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 409.0
  • Bit_score: 799
  • Evalue 1.80e-228
RpoD subfamily RNA polymerase sigma-70 factor KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 421.0
  • Bit_score: 363
  • Evalue 1.10e-97
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 362
  • Evalue 1.00e+00

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Taxonomy

GWA1_OD1_36_15 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGAAAACAAAAAACAAAAAATCAAAGAAAAAAATCGCAAAATCTAAATCAAAAAAGATCCACAAGAAAGCTGTAAAAAAGGTGACAAAAAAAAGAAAAGCACTTAAAAAATTCAAAAAACCCTTAAAAACAAAGGCTCTAAAAAAACTGACCTCTGCAGAAAAAAAAGCAGACGCCTTTGCTCGTCTTTCAAGTGAATTGATAGAAAAAGGGCGAAAAAGAGGATTTATCACCTATGATGAAATACTAAAGACTTTTCCGGATGTTGAAAATAATATTTTCTTCCTAGACGAACTGTATGAGAAATTTGCCATTGCGGGCATAGATGTACTGGAAGGCGGAAACTTGCTTAATCTGGATGATGATAATCTTGATAAGGATTTAAATAAATCTACCATCCATGACTCTATTCAAATGTATTTGAAAGAAATAGGACAATATTCGCTTATTCATGCAAGCGATGAAAAATATCTCGCTAAACGCATAGAACTAGGCGATCTGGAGGCGAAAAATTTATTAGCCAGAGCGAATCTACGCTTAGTGGTTTCAATTGCTAAAAAATATGTAGGTAGAAGCGCTAATTTAAACCTCTTGGATCTAATTCAAGAAGGGAATTTAGGACTATTTAAGGCAGTTGAAAAATTCGATTGGACTAAAGGATATAAATTTTCCACTTATGCCACCTGGTGGATTCGTCAATCTATTACTCGTGCCTTAGCTGACCAAAGCAGGACCATTCGTATACCGGTGCATATGGTGGAAACTATTTCAAAATATAAACAAACATATCGAAAACTTAGCCAAGACCTGGGACGAGAACCGTTAGCGGAAGAAATTGCCACAGAAATGAATATTCCCGTTGAAAAAATCCACGTAATTGAAAACATCAGCCAAGAGACTGTTTCTCTAGAACAGCCGGTGGGGGACGATGACGATAAGTCAACTCTTGAAAATTTTATTCCGGATGATAAAATTTTGCGTCCGGATCAGGAATCTTCTCGCAGGATCTTGTCCGATCAGATTCGGGAAGTTTTAAACGAACTGAATCCGAAAGAATGCAAAATACTGGAAATGCGTTATGGATTAGTAGATGGCATTCAACATACTCTTGAACGAGTAGGGGAGGAGTTTGGTGTTACTCGCGAACGTATTCGTCAAATAGAAGCGAAAGTTCATGAAAAACTTCGCCAACACGAAAAAATCACAAGGTTAAAGAATTATTTTGACTAA
PROTEIN sequence
Length: 410
MKTKNKKSKKKIAKSKSKKIHKKAVKKVTKKRKALKKFKKPLKTKALKKLTSAEKKADAFARLSSELIEKGRKRGFITYDEILKTFPDVENNIFFLDELYEKFAIAGIDVLEGGNLLNLDDDNLDKDLNKSTIHDSIQMYLKEIGQYSLIHASDEKYLAKRIELGDLEAKNLLARANLRLVVSIAKKYVGRSANLNLLDLIQEGNLGLFKAVEKFDWTKGYKFSTYATWWIRQSITRALADQSRTIRIPVHMVETISKYKQTYRKLSQDLGREPLAEEIATEMNIPVEKIHVIENISQETVSLEQPVGDDDDKSTLENFIPDDKILRPDQESSRRILSDQIREVLNELNPKECKILEMRYGLVDGIQHTLERVGEEFGVTRERIRQIEAKVHEKLRQHEKITRLKNYFD*