ggKbase home page

gwc2_scaffold_81143_5

Organism: GWC2_OD1_52_8

near complete RP 37 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 10 / 38 MC: 3
Location: 2475..3149

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000313|EMBL:KKW29320.1}; TaxID=1618676 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWC2_52_8b.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 443
  • Evalue 1.40e-121
tRNA pseudouridine synthase D TruD KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 90.0
  • Bit_score: 60
  • Evalue 6.50e-07
tRNA pseudouridine synthase D similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 60
  • Evalue 8.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_OD1_52_8 → Kaiserbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCTCGAAATTTCAATACGCATTTGCTACACTATGTTTATGGAGCCCGATGTTCAAGAGCGAGAGCGTGCTTTTTTTGAGGCCGAGAGGAAACGAGTCCCTCACTTATTTGAACGCGCGTCCATGATTGATTCCCCGGAATTTTTGAAATCGATCGGCATTGAAGCCATAGATAAGGATCTTCCGGTGGGATATCTCAGGTTGTTTCCGCAGGATTTTATTGTGGAGGAAATTGCGCGCAGCAAAGAACTTCGCACCATTGACATCGATTCGTCTGTACCCGACGTTTCTCAGGAGGGGCAGACATGGTATGCAGACTTGGTGAAGATCGGAATTTCTACGCTTGACGCGCAAGCGCATCTGGCAGAAATTCTCGGCATTGAACCTCGTGCCATTGGGTTTGCCGGCATTAAAGATCGTTTAGCGCTTACCGCCCAGGCAATCAGTATCAGGAATATTGATGAAGTCGAGAAACTTCAAGAAATACGGAAAGGGAGCGATTGCCAACGGAGATCTTCAGGGCAACCGGTTTATTATCACGCTTCGTTCACCGGAAAGTTTTTCCGAAAGCACCTCTTTGGAGATACGAAAGAAGTTACAAAATATTCAGGAAGAAGGATTCTGGAATTTTTTCTCGTTCCAGCGATTTGGCACTCCGCGGCTGCTGAGTCATAA
PROTEIN sequence
Length: 225
MLEISIRICYTMFMEPDVQERERAFFEAERKRVPHLFERASMIDSPEFLKSIGIEAIDKDLPVGYLRLFPQDFIVEEIARSKELRTIDIDSSVPDVSQEGQTWYADLVKIGISTLDAQAHLAEILGIEPRAIGFAGIKDRLALTAQAISIRNIDEVEKLQEIRKGSDCQRRSSGQPVYYHASFTGKFFRKHLFGDTKEVTKYSGRRILEFFLVPAIWHSAAAES*