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gwa2_scaffold_29196_2

Organism: GWA2_OD1_41_397_v_partial

partial RP 5 / 55 MC: 2 BSCG 7 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(822..3800)

Top 3 Functional Annotations

Value Algorithm Source
HsdR family type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_03_48_12_curated UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 999.99
  • Bit_score: 901
  • Evalue 1.10e-258
type I restriction-modification enzyme, R subunit KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 999.99
  • Bit_score: 883
  • Evalue 4.60e-254
Putative type I restriction enzyme HindVIIP R protein (Fragment) similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 797
  • Evalue 3.00e+00

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Taxonomy

R_RIF_OP11_03_48_12 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 2979
ATGTTTGAATCTGATATTGAAAAATTTGTGATAGAGCTTTTGCGAAAGGAGGGATTTGTCCATCTCTCTCCCGAAGCATTGGCGGAGGAACGAGAACAACTAGACGAGGTTGTGCTGATTGGCCGCCTGCGAAAAGCGGTGGAAGACTTGAACCATGACGCAAATGAAACGGTGCGAGAAAGAGCAATCAAAGAGGTTTTGGAACTAAACAAACCATGCATTGCCGACAATAACGAGGATTTTTATCGGATGCTCATTGAGGGTATAAGCATTGAAATAGCGGAAGACGGGCATATTCGAGGCAAGGTTGTGCGTCTTATAGATTTTGAAAACATTGAAAACAATGATTTTGTTGTCACTAATCAATTTTCAGTACACGGAACGCGCGAACGACGACCGGATGTGGCGCTTTTTGTAAATGGCTTACCGATTGTCGTTATTGAACTCAAGAATCCGGAAGATGAAAACGCAACGACATATTCAGCTTACAAACAACTGCAAACATACAAGCAGGATATTCCAAACCTGTTTTTCTACAACGGCATTTTGGTAGCCTCGGATGGTTTTGATGCGAGAGCCGGATCCTTATCGGCCGACTGGAATAGATTTGTTGAATGGAAGGATAAAGATGGCGCAAAGAAAAATATAAAACTTGTGCCACAGATTGAGACTCTTGTTTCTAAAATGCTCAATAAAAAGACCCTTCTTGATTTAGTACGAAACTTTACTGTTTTTGAGAAAACAAAACAGCAGGATAAAAGCACAGGGCTGATTACTGTTGAAACTATCAAAAAAATCGGCGCATACCATCAATACCATGCGGTAAATAAAGCGGTGGCCGCGACGCGCGAAGCCGCAGGGAAAGGCGGCACGAGACGCGGCGGTGTTGTGTGGCACACGCAGGGATCAGGAAAGTCACTTTCCATGGTCTTTTACACCGCGAAGTTGGTGCAGGAGCTGAATAATCCAACAGTGGTAGTTATTACTGATAGAAACGATCTTGATGATCAATTATTTGATACATTTTCGGCTAGTCGCGGACTTTTACGGCAGGACCCTGTTCAAGTAAAAAATCGAGGCGACTTGAAACATAAACTCAAGGTGGCGAGTGGGGGGATTGTTTTTACAACCATTCAGAAATTCTTACCGGAAGATAACAGTGAAGTTTTCGATCTGCTTTCGGAGCGTGAAAATATTGTCGTTATCGCTGACGAGGCGCATCGCAGTCAATACGGATTTAAGGGAAGAATCACCCAGGGCGCTCGGCTTAAATATGGTTTTGCGAAATATGTGCGCGACGCTTTGCCAAACGCTTCATTTATCGGCTTTACCGGCACGCCTATCGAGAAAGCGGATAAATCAACGCAAGCGGTCTTTGGTGACTATGTTGATGTATATGACATTGAGCAGGCGGTAAAAGATGGGGCGACTGTACCAATCTATTACGAAAACCGCCTCATAAAAATACATCTTAAAGATGAAGAGCGAAAACAGTTGGACGAGGTGGTAGACGAAATGACCGAAGAGGACGAGCCGGAAGAATCAGACAAAGCAAAAGCGAAGTGGGCAAGAATAGAAGCTGTCGTTGGGNNNNNATTAAGACCAGAATGGCACGACGACTCTCTGAAAGATGGAAAAATAAAGGTTGTGATGACAACTTCCGCGACCGACAATCCCCGGTTTCAAAAGCACGCCACCACAAAGCTAGAGCGGCGAGAGTTGGCTGATAGATTTAAAGACCCCGCTGATGCCTTGAAAATCGTTATTGTGCGCGATATGTGGCTCACTGGTTTTGACGCTCCGTGCGCAAAAACTATGTATGTGGACAAACTCATGCGCGGTCACAATTTGATGCAAGCCATTGCACGAGTTAATCGTGTATACAAAGATATTCGCGGTGGCTTGATTGTGGATTATATAGGCATTGCAAGAGACCTAAAAAAAGCGTTGGCTGTGTACACTGAAAGTGGCGGACAAGGCGCTCCCACTTTTGATATTTCCGAAGCGGCTGGAACAATGCAAGAGAAGTTTGAGATTATTGACCACATGTTTAGCGGTTTTAAATACCGAGAATATTTCGATTCTGACACTCAAGGAAAAATGTGTCTGATACTGCAGGCGCAAGAATATGTTCTCGGATTGACTGATGGAAAGAAGCGATTTGTTGAACAAGTGGAAAGTCTGACAAGGGCGTACGCGCTTGTCGCCCCTCGTCCTGAAGCAATGGCTCTAAAAGAGGCATTAGCTTTTTTCCAGGCCGTTAAAATGCGACTAACTAAGTTTGAAACAAAGAGGAAAGGGCGAGGTTCCGAGGAAATTGAAACTGCAATTCGGCAGATTATTGATAATGCGCTGGTTACGGAAGGGGTTATTGATATTTTCGGCGCAGCCGGAATTAAGCGCCCCGATGTTTCTATTTTGTCCGAAGAGTTTCTTGCCGAAGTGCAAGGTTTGGATCGCAAGAATCTTGCTTTGGAGTTGATGAAAAAACTTTTAACTGGCGAAATTGATAAAGTAAAAAGTACGAATATCGTACAAGGTGTTAAATTTTCGGAAATGCTGGATAAGGTGTTGAAAAAATACCATGCAAATATAATTACAGCGGCTGAGATTATTGAAGAGTTACTCGGTATAGCTCGCGAAATGCGAGGACAGAGCGAAAGAGCAAGAGAATTGAAACTGACTGATTACGAAATGGCATTTTATGATGCTTTGGCAAACAATGAAAGCGCTCGTGAAGTTTTGAGTCAAGACACGCTACGGCAACTAGCATCTGTATTGGTTGAAAAAGTGAAAGAGAACAGCACGATTGATTGGACAATACGAGAAAGCGCCCGAGCCAAACTTCGCGTGATGATTAAACGCACATTAAATAAATTTGGGTATCCGCCAGACATGCAGAAACTGGCTACGGAACTGATTTTGAAACAGGCGGAACTACACATTGATGAGGCTATGAAGAGCGGGGGCGACGATTAA
PROTEIN sequence
Length: 993
MFESDIEKFVIELLRKEGFVHLSPEALAEEREQLDEVVLIGRLRKAVEDLNHDANETVRERAIKEVLELNKPCIADNNEDFYRMLIEGISIEIAEDGHIRGKVVRLIDFENIENNDFVVTNQFSVHGTRERRPDVALFVNGLPIVVIELKNPEDENATTYSAYKQLQTYKQDIPNLFFYNGILVASDGFDARAGSLSADWNRFVEWKDKDGAKKNIKLVPQIETLVSKMLNKKTLLDLVRNFTVFEKTKQQDKSTGLITVETIKKIGAYHQYHAVNKAVAATREAAGKGGTRRGGVVWHTQGSGKSLSMVFYTAKLVQELNNPTVVVITDRNDLDDQLFDTFSASRGLLRQDPVQVKNRGDLKHKLKVASGGIVFTTIQKFLPEDNSEVFDLLSERENIVVIADEAHRSQYGFKGRITQGARLKYGFAKYVRDALPNASFIGFTGTPIEKADKSTQAVFGDYVDVYDIEQAVKDGATVPIYYENRLIKIHLKDEERKQLDEVVDEMTEEDEPEESDKAKAKWARIEAVVGXXLRPEWHDDSLKDGKIKVVMTTSATDNPRFQKHATTKLERRELADRFKDPADALKIVIVRDMWLTGFDAPCAKTMYVDKLMRGHNLMQAIARVNRVYKDIRGGLIVDYIGIARDLKKALAVYTESGGQGAPTFDISEAAGTMQEKFEIIDHMFSGFKYREYFDSDTQGKMCLILQAQEYVLGLTDGKKRFVEQVESLTRAYALVAPRPEAMALKEALAFFQAVKMRLTKFETKRKGRGSEEIETAIRQIIDNALVTEGVIDIFGAAGIKRPDVSILSEEFLAEVQGLDRKNLALELMKKLLTGEIDKVKSTNIVQGVKFSEMLDKVLKKYHANIITAAEIIEELLGIAREMRGQSERARELKLTDYEMAFYDALANNESAREVLSQDTLRQLASVLVEKVKENSTIDWTIRESARAKLRVMIKRTLNKFGYPPDMQKLATELILKQAELHIDEAMKSGGDD*