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gwc2_scaffold_10891_7

Organism: GWC2_OD1_41_9

near complete RP 41 / 55 BSCG 42 / 51 ASCG 8 / 38
Location: comp(3602..4123)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKU16392.1}; TaxID=1618653 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_45_9b. UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 173.0
  • Bit_score: 344
  • Evalue 6.70e-92
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 171.0
  • Bit_score: 116
  • Evalue 7.80e-24
ECF subfamily RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 115
  • Evalue 9.00e+00

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Taxonomy

GWB1_OD1_45_9_partial → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGCAGCTCGCCAAAAACGGCGATACCGAGGCATTCGGCCAGCTTTATGAATTGTACTTCAAGCCGGTCTACCGCTATATTTATTTAAGAACAAAAAGCAAAGAAGAAGCCGAGGATTTGAGCCAAGTAGTTTTTATAAAAATTTTTAAATCAATCGGCGGATTTCAAGAACAAAACAAACAGCCGCTCGCTTACTTTTTCACAATCGCCCGAAATACAGTTATAGACCACTGGCGAAAAAAGAAAGATATTTTGACTGACAAACCGCCGGAAACGCTGTCCGCCGAGTCATTCGAAAATCCCCAACACCTTATTGACCAAAAATCAACGGCTCAAGCAGTTTATCAAGCAATTGAAAATCTTACCGAAGAACAGCAGGAAGTGATCATCTTAAAATTCATAAACGACCTGTCTACGACCGAAATCGCAAAAATTTTAGACAAAAAGGAAGATGCGGTAAGACAAACGCAATGCCGGGCCTTAAAAATTCTTAAACAGTATTTTAAAGAATATGGAATATAA
PROTEIN sequence
Length: 174
MQLAKNGDTEAFGQLYELYFKPVYRYIYLRTKSKEEAEDLSQVVFIKIFKSIGGFQEQNKQPLAYFFTIARNTVIDHWRKKKDILTDKPPETLSAESFENPQHLIDQKSTAQAVYQAIENLTEEQQEVIILKFINDLSTTEIAKILDKKEDAVRQTQCRALKILKQYFKEYGI*