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gwc2_scaffold_45800_4

Organism: GWC2_OD1_53_7

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 3 ASCG 7 / 38
Location: comp(4155..4703)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:KKW34072.1}; TaxID=1618858 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_53_21.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 358
  • Evalue 6.10e-96
ylaC_2; RNA polymerase sigma factor YlaC KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 169.0
  • Bit_score: 85
  • Evalue 2.00e-14
RNA polymerase ECF-type sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 84
  • Evalue 2.00e+00

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Taxonomy

Parcubacteria bacterium GW2011_GWA2_53_21 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCAAGGCCTTCAGGAAAAATTTCTTTTATTTCGCGTCTTGCGCTTCCGCGACAAGCAGGCATACGGGGAATTATATCTTGCCTATGCTTCTCGCTTGCGCCGGTATCTGACCTTTAAATTGCCCACGGAGCATGATGCGGACGAGGTTCTCGCCGAGGTGTTTCTGAAGGCATGGGATTATCTCATTTCCACGCCGGTTGAAAGCTTGGGCGGGCTCCTGTTCTCCATCGGGCGTCACCGCGTGGCTGACTACTACCGCGCGAAGGGCCGAAGGGAAGAGACGGCATCCGAAGAGTTTGAGAAAGACCTGCTCTTTGTGGATGATGGCAAGAGTGCGGAGGGGATCCGCGATCGGGCGGAAGCCGAACTTCTGCGGTCAGCGATTCAAGCCCTTCCTCACGATCAGCAAGCCGTCATCCTTCTGCGGTACTTCGACGGTCTCTCCGTTTCCGACGTCGCGGAACATTTGCAAAAAACCGACAACCACGTTCGAGTCCTCACGCATCGAGGGTTGAAAGCGATCAAAGAAAAAGTAACCAGCATCTAA
PROTEIN sequence
Length: 183
MQGLQEKFLLFRVLRFRDKQAYGELYLAYASRLRRYLTFKLPTEHDADEVLAEVFLKAWDYLISTPVESLGGLLFSIGRHRVADYYRAKGRREETASEEFEKDLLFVDDGKSAEGIRDRAEAELLRSAIQALPHDQQAVILLRYFDGLSVSDVAEHLQKTDNHVRVLTHRGLKAIKEKVTSI*