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gwc2_scaffold_228_57

Organism: GWC2_OD1_44_22

near complete RP 42 / 55 MC: 2 BSCG 46 / 51 ASCG 10 / 38
Location: 49797..50375

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKS54064.1}; TaxID=1618822 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_28.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 384
  • Evalue 6.50e-104
RNA polymerase sigma factor SigW KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 185.0
  • Bit_score: 119
  • Evalue 1.30e-24
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 122
  • Evalue 1.00e+00

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Taxonomy

Parcubacteria bacterium GW2011_GWA2_42_28 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGTCTACTGTAACGACAGATGTGTCGAGTGACGCCCAATTAATCAAAAAATATCTAAAAGGCGATGAGAAATCGCTCGAATTATTGATTAGAAGCTATCTTCAACCTATCTACAGTTTTGTTTATCGATATCTCGGCAATGCGACAGATGTGGAGGACGTTACTCAAGAAGTGTTCGTGCGGGTGTGGCGCAATTTGAAAAAATTTGACACTAACAAACCTTTCAAAACCTGGCTGTTTAGCATCGCCAAAAACGCGGCCATTGATTGGCAAAGGAAGAAAAAGCTCATCCCCTTTTCTGATTTTGAGACTGAAAACGGCGACAATCCGTTCCTTGAAAACATCCCTGATCCGGCGCCTTTGCCGAGCGAGCTTTTGGCACGGGCTGATTTAGCGCTTGTCTTAAACGAGGCCATGGACCAATTGCCGGTCAAACAGAAAATGACCCTTTTTTTACGTTATAACGACCATTTTACTTTTCGAGAAATTGCCGAATCTTTGGGCGAGCCGCTAAACACAGTAAAAAATCGTCATTTGCGAGCGCTGATTGCACTAAAAAAAATTATCGGCGAAAAATAA
PROTEIN sequence
Length: 193
MSTVTTDVSSDAQLIKKYLKGDEKSLELLIRSYLQPIYSFVYRYLGNATDVEDVTQEVFVRVWRNLKKFDTNKPFKTWLFSIAKNAAIDWQRKKKLIPFSDFETENGDNPFLENIPDPAPLPSELLARADLALVLNEAMDQLPVKQKMTLFLRYNDHFTFREIAESLGEPLNTVKNRHLRALIALKKIIGEK*