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gwc2_scaffold_5872_5

Organism: GWC2_OD1_39_14

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 ASCG 12 / 38
Location: 5275..6573

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=GWC2_OD1_39_14 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 432.0
  • Bit_score: 832
  • Evalue 2.00e-238
RpoD family RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 431.0
  • Bit_score: 374
  • Evalue 5.20e-101
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 373
  • Evalue 6.00e+00

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Taxonomy

GWC2_OD1_39_14 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGTCAAACAAAAAGACAACAATTAAACATAAAACTGCAAAAAAGATTTTAAAAAAATCTACAAAACAAGCAGTGAAAAAGAGTGTTGTTAAAAAGGTGGCAAAGAAAGCCGGTGTAAAAACCACGAAAAAAAATATTGCAACAATAAATAAAGTTGCAAAACGGGTTGTTTATGCCAAGGCAGTGCCGCCAGCGCCAGAATTGGTCGAGAAGCTTATCCGTAAAGGACAGACGCGTGGTTTTGTTACTGAAACAGAAGTGCTTTACACTTTTCCGGAAATCGAAGATTACATTGTAGTTTACGAGAATTTTTTGGATGAACTTGATTTGGCTGGTTTGCAAGTCATGGAAACCAAAGAAGGGGTTTTGGGACGCGGAAAAGAACTTCAAGATGCCATGACCAAGATTCGTATTGAAACTCCATCCAAAACAGACAATGTTCCAACTACGGCCGGACCGGATGGAATGTTGGAGCTTTCTCAAGATTCCATTCAAATGTATTTGCGGGAAATTGGAAAAATTCCTCTGTTAACGACTGAGGAAGAGGTGGGGCTTGCCAAGCGTAAAGAACGCGGAGATAAAGAAGCAGAACAACGTTTGATTGAAGCAAACTTGCGTTTGGTGGTTTCAATCGCGAAAAAATTTGTTGGTAAACAATTATCTTTGCTTGATTTGATTCAGGAAGGAAATATTGGTTTATTCCGCGCGGTTAAAAAGTTTGAATATCGAAAAGGTTATAAGTTTTCAACTTATGCGACCTGGTGGATCCGTCAGGCAATTACACGCGCTTTAGCTGACCAGTCACGTACGATCCGAATTCCAGTGCACATGGTGGAAACAATCAATCGCTTCCAGCAAATTGAACGCCAGTTGATTCAAGATTTGGGGCGTGAACCAATGCCGGAAGAAATTGCTTCAGAAATGGATGAAGATATTGAACGCGTCCGACATATTATTAAAATTTCACAAGACACCGTATCCCTTGAAACATCAGTTGGTGAAGATGATGAAGATTCAACTTTGGAAGATTTTATCGAAGATGTAAAAAATGTTTCACCGGATCGTTCGGCCGCTTTGCAACTTTTGCGCGATTATGTGCGCGACGTAATAAAGGATTTGTCGCCACGTGAACAAAAGATTTTGGAAATGCGCTTTGGTTTGACTGACGGCGTGTCGCATACCTTGGAAGAAGTCGGAAAAGAATTTGATGTGACCCGCGAACGCATTCGCCAAATTGAAGCCAAAGCACTGGAACGCATCCAGACGCATATGGGGATTGAGAAATTAAGGGATTATTAA
PROTEIN sequence
Length: 433
MSNKKTTIKHKTAKKILKKSTKQAVKKSVVKKVAKKAGVKTTKKNIATINKVAKRVVYAKAVPPAPELVEKLIRKGQTRGFVTETEVLYTFPEIEDYIVVYENFLDELDLAGLQVMETKEGVLGRGKELQDAMTKIRIETPSKTDNVPTTAGPDGMLELSQDSIQMYLREIGKIPLLTTEEEVGLAKRKERGDKEAEQRLIEANLRLVVSIAKKFVGKQLSLLDLIQEGNIGLFRAVKKFEYRKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINRFQQIERQLIQDLGREPMPEEIASEMDEDIERVRHIIKISQDTVSLETSVGEDDEDSTLEDFIEDVKNVSPDRSAALQLLRDYVRDVIKDLSPREQKILEMRFGLTDGVSHTLEEVGKEFDVTRERIRQIEAKALERIQTHMGIEKLRDY*