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gwc2_scaffold_877_31

Organism: GWC2_OD1_44_17

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(46118..46624)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 336
  • Evalue 2.30e-89
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 153.0
  • Bit_score: 81
  • Evalue 2.10e-13
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 81
  • Evalue 2.00e+00

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Taxonomy

R_RIF_OD1_02_44_20 → RIF-OD1-2 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAAATTATCTTCAGTACGGGAGAAAAAATTCACTGATGCGTATAATTCGTATAGTGACGCTCTATTTCGGTTTTGTTTTTTCCGCATATTTGACCGCGAACGAGCCAAAGAACTGATGCAGGAGGCTTTCACCAGAAGCTGGGATTATGTAAGGCGCGGAAATGACATCAAAAATATCCGCGCGTTTCTTTATAAAACAGCCAGACATCTTATTATTGATGAGGCGCGAAAGAAGAGCAATGCTTATAAAGAAGATATTGATACATGCGAAGAACGCCTTGCTGTACCGGCTAAACAAGAATTAGATATAGATATCGGACTCGCTTATGACGCGCTTAAAAAACTAGATGAACCCTGCCGCGAAGCCGTTACGTTGCGCTTTGTAGAAGGTTTTTCACCTAAAGAAATCGCGGCGATGGTTGGGGAATCGGAAAACGTAGTTTCGGTTCGCATCCATCGCGGAATTCTAAAACTTCGCGCGCTTTTGCTTCACAATGACCCATAA
PROTEIN sequence
Length: 169
MKLSSVREKKFTDAYNSYSDALFRFCFFRIFDRERAKELMQEAFTRSWDYVRRGNDIKNIRAFLYKTARHLIIDEARKKSNAYKEDIDTCEERLAVPAKQELDIDIGLAYDALKKLDEPCREAVTLRFVEGFSPKEIAAMVGESENVVSVRIHRGILKLRALLLHNDP*