ggKbase home page

gwa2_scaffold_2225_23

Organism: GWA2_OD1_49_16_partial

partial RP 33 / 55 MC: 3 BSCG 34 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: 23235..24020

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000313|EMBL:KKW07836.1}; TaxID=1618851 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_16.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 514
  • Evalue 9.60e-143
tRNA pseudouridine synthase a KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 232.0
  • Bit_score: 205
  • Evalue 2.50e-50
Pseudouridine synthase similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 199
  • Evalue 9.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWA2_49_16 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGAAAATTAAAACTATCCCTAAAAAAGAAAAAATTGAAAAGACGGAACGACCACGACCTGTCTCTAACGGGGTGGAGCCACTTGAATTCCCTATTCGGTTGAATCGTTATCTCGCCCACAAGGGCTATACGACAAGGCGTGGTGCTGATTTGCTGATTACCAAAGGTCTTGTTACGATAAATAGCAAAGTCGCCACGCTTGGCACAAAAGTCTCTAAAGACGACGTCGTCGAGGTTTCCCCTCGTGTGATTTCAGAAGCGGACGCAAAATACCGCTATCTTGCGTACAATAAACCCCGCGGCATATCGACCGATTCCCAAGGTGGTACCCAGAGTATCACTGGTGGGCAACCGGCGCTCCGCGGGCTTTTCCCTCTTGGTCGCCTCGACAAAGATTCGCACGGACTTATCATTCTTACGAACGACGGGCGCTTGACCGAGCGATTGCTCTCCCCCGACCGCGCCCACGAAAAAGAGTACCTCGTGCGCGTTGATAAACCAGTCACCGACCGCTTCATCCGCAGGCTCGAGCGTGGTATCACCATTGAAGGGTATCGCACCAAACCCGCCACCGCGCGCCGTACTGGAGAAACCGTATTTCGTATTGTACTCACCGAAGGCAAAAAGCACCAGATTCGCCGCATGTGCGCGGCGGAGGGCTACCAAGTACAAGAGCTCACCCGCGTTCGGATTATGAATATTGCGCTCGGCAATCTCAAAGAGGGTGCGTATCGCGATATCATTGGGACAGAGCTCTTAACGTTAAAGAAAGACATCGGGTTATAA
PROTEIN sequence
Length: 262
MKIKTIPKKEKIEKTERPRPVSNGVEPLEFPIRLNRYLAHKGYTTRRGADLLITKGLVTINSKVATLGTKVSKDDVVEVSPRVISEADAKYRYLAYNKPRGISTDSQGGTQSITGGQPALRGLFPLGRLDKDSHGLIILTNDGRLTERLLSPDRAHEKEYLVRVDKPVTDRFIRRLERGITIEGYRTKPATARRTGETVFRIVLTEGKKHQIRRMCAAEGYQVQELTRVRIMNIALGNLKEGAYRDIIGTELLTLKKDIGL*