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GWB1_scaffold_5341_10

Organism: GWB1_OD1-1_43_66_partial

partial RP 30 / 55 MC: 1 BSCG 32 / 51 MC: 3 ASCG 5 / 38 MC: 1
Location: 9898..11637

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=RIFOXYC2_FULL_RIF_OD1_03_42_11_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 579.0
  • Bit_score: 1121
  • Evalue 0.0
hypothetical protein KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 579.0
  • Bit_score: 453
  • Evalue 9.00e-125
Type IV pilus assembly protein PilB similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 444
  • Evalue 3.00e+00

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Taxonomy

RIFOXYC2_FULL_RIF_OD1_03_42_11_curated → RIF-OD1-3 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGCCTAAGTCAAAACTTAATATTCAGTTACAAGATGTCTTGGTTGCCAAAGGACTCCTAACTGCCGAAAAAGTTCAGGAGCTGGAGCAAGCTGTCGCCACTGATGGGCGGCAGCTTGAGGATATTTTGTTGGAAAGGAATTTGGTCAAGCCAGCAGATATCATGCAGGCCAAAAGCCAGCTGTTCAACATGCCGGTGGCGGATTTGGTGGATAAGGAAATGCCGCGCGAAGTAATACAACTTATTCCGTATGAGCTGGCGGAAAATTACCAACTAGTGGCTTTTGACCGCCAGGCTGATGAAGTTTCAGTGGCTATGGTTAATCCAGGAAATTTTAAGGCGATTGAAGCCATAGAATTTCGAGCACGCGAACAAGGCTGGAAACCTAAGTACTTTATTACCAATACCGACAGCCTTAAAAGCGCGTTTAAATATTACGGCAGTCTTTCCAGTGAAGTTAAGGAAGCCCTGACTTTAGCTGAGGGCAAATTTTCTGAAATTCCGGAATTAGCTGAAGAAGAACAGGGCAAGTTGGAAGAGGTAGTGAAAACAGCGCCGGTGGCCAAAATGGTAGCGGTTATTTTCCGCCATGCCGTGGAAGGTGCTGCCTCCGACATTCACATTGAGCCGGTTCAAGATGAAACGCGCGTGCGCTATCGTATTGACGGCGTGCTGCATACTTCTATTGTGTTGCCGCGTTATATTCATTCCGCGGTAATTAGCCGCATTAAGGTGCTGGCGAACATGAAGATTGATGAAACGCGCGTGCCACAGGACGGTCGTATTCGGCTGACGATCGGCGGTCGGTCGGTTGATTTCCGCGTTTCCACAATGCCATTATTGGGTAGCGAGAAAGTGGTGTTGAGAATTTTGGATACCGCCACGGGATTGAAGAGTTTTGAAGAATTGGGTTTTGCCGGCTCCACTGCCAAACTTATTGATGACAGCTTAAAAAGGACTCAAGGCATGTTCTTGGTTTGCGGCCCAACTGGCAGTGGTAAATCAACCACGCTTTATACCGCCCTGAACAAGCTTAATGACGAAGGTTCCAATATCATTACTTTGGAAGACCCGGTGGAATATTATTTAGAAGGAGTGAACCAATCACAAGTCAATGCCGAAGTTGGCCTGACATTTGCCTCAGGCCTCAGGTCTATTTTGCGCCAAGACCCGGATATTATTATGGTGGGCGAGATTCGCGATATTGAAACAGCTGATTTGGCTATCCATGCTTCTTTGACCGGGCACATTGTGCTTTCAACTTTGCACACCAATGATGCGCTGGGTTCCATTCCACGGTTGGTGGATATGCATGTGGAGCCGTTTTTGTTAGCTTCTACTATTAATGTTGTAGTAGCTCAACGTTTGGTGAGGCGGATATGCCGGTATTGTGTAACCGAGGCTGAGGTACCAGCTGAATTAGTTGATAAAATTAAGAAATCTTTAAGTGAGTTGCCGCCCGGGGGTGATGAGCAAATACCCAAAGGGACTTGGAATTTTAAAAAAGGCCAAGGTTGTGCTCGCTGCAATTTTACTGGCTACAAAGGCCGGGTGGTAATTGCCGAAGCTTTTTCTAACACCCACGAATTGCAGCAAATCATAGTTGCCGGTTTGAATCCAGGGGCTTTGCGAGACGAATTTAAGCGGCAGGGAATGATCACGATGGAACAAGATGGTTTGATTAAGGTGTTACGGGGGGTCACCACCGTGGAAGAAGTATTAAGCGCAACTAACGATTAA
PROTEIN sequence
Length: 580
MPKSKLNIQLQDVLVAKGLLTAEKVQELEQAVATDGRQLEDILLERNLVKPADIMQAKSQLFNMPVADLVDKEMPREVIQLIPYELAENYQLVAFDRQADEVSVAMVNPGNFKAIEAIEFRAREQGWKPKYFITNTDSLKSAFKYYGSLSSEVKEALTLAEGKFSEIPELAEEEQGKLEEVVKTAPVAKMVAVIFRHAVEGAASDIHIEPVQDETRVRYRIDGVLHTSIVLPRYIHSAVISRIKVLANMKIDETRVPQDGRIRLTIGGRSVDFRVSTMPLLGSEKVVLRILDTATGLKSFEELGFAGSTAKLIDDSLKRTQGMFLVCGPTGSGKSTTLYTALNKLNDEGSNIITLEDPVEYYLEGVNQSQVNAEVGLTFASGLRSILRQDPDIIMVGEIRDIETADLAIHASLTGHIVLSTLHTNDALGSIPRLVDMHVEPFLLASTINVVVAQRLVRRICRYCVTEAEVPAELVDKIKKSLSELPPGGDEQIPKGTWNFKKGQGCARCNFTGYKGRVVIAEAFSNTHELQQIIVAGLNPGALRDEFKRQGMITMEQDGLIKVLRGVTTVEEVLSATND*