ggKbase home page

GWB1_scaffold_18045_4

Organism: GWB1_OD1_57_6

near complete RP 40 / 55 BSCG 44 / 51 ASCG 8 / 38 MC: 2
Location: comp(2488..3294)

Top 3 Functional Annotations

Value Algorithm Source
Metalloproteinase, extracellular matrix glycoprotein VMP7 {ECO:0000313|EMBL:KKW45321.1}; TaxID=1618889 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_57_6.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 268.0
  • Bit_score: 554
  • Evalue 1.10e-154
Os08g0108300 protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 90
  • Evalue 5.00e+00
similarity in-house
DB: RefSeq
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_OD1_57_6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGGACCAGAATCAAATCGAACCAACATTAGAGGCCAGTATTCGGGAGGTGATGCAGACGTTGCCGCCGCCAATTCGCAGCTACCTTGCGCAGGGAAGGTACACGTCGGTCGCGAAAAATTTAATGATGAAGCATCGCCTGCGCATTGACCAGGCGGGCATTCTCGAGCGGGAAATAATGCTTCTTCTCATGGGCATCGAGAATCCGGATGAGTTTACGCAGTCGCTTGCCGAGGAAGCGAAGCTCGACGAACAGACCATCAATGGCATCGTGCAGGACGTGAACGAGCAGATTTTTATTCCGCTTCGGGAAGAGATGCGCCGTGGCGAACAGAAACCGCAACAGTCGGGACCCGCGGCACCTGTGGCGCCGCGGGCGACCATACTGCCTCCGCGTACGACCGTCATTCCCGCGAATCCGCAGATGCCCTCGCGCCCTCCGGAAGCATTTGTCTCGGTGCCGAAATACGCTCCTCCCCCCAAATATTTTAAATTGCAGAATAAAATCCCTCCCCCGGCGCCGCCGCCCCCAAAGCCGCTCGGTACCGACAGATTGCTTGAAGACCACGAAGAACCACACATCGAATTTCACAATGTGCCGTCGCCCGGTCCGCGCATGGCACCCCCCCGCCCTTCCATAGCCCGTCAGCCGACGAGCGAAGCGGGGCCGCCTCCGAACCTGCCGGGCGCAATGCCTCCCCCAAGACCCGCTCCTCCGTCCCCCGCCGCGTCCCCGTCGCGTCCGAAAACTTCGCCTCCGCCTGCCGAAGGCTACTCCGCCGACCCGTATCGCGAACCGATCGAGTAA
PROTEIN sequence
Length: 269
MDQNQIEPTLEASIREVMQTLPPPIRSYLAQGRYTSVAKNLMMKHRLRIDQAGILEREIMLLLMGIENPDEFTQSLAEEAKLDEQTINGIVQDVNEQIFIPLREEMRRGEQKPQQSGPAAPVAPRATILPPRTTVIPANPQMPSRPPEAFVSVPKYAPPPKYFKLQNKIPPPAPPPPKPLGTDRLLEDHEEPHIEFHNVPSPGPRMAPPRPSIARQPTSEAGPPPNLPGAMPPPRPAPPSPAASPSRPKTSPPPAEGYSADPYREPIE*