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GWB1_scaffold_2193_18

Organism: GWB1_OD1_56_8

partial RP 34 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 8 / 38
Location: comp(14368..14919)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 369
  • Evalue 2.70e-99
ECF subfamily RNA polymerase sigma-24 factor KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 190.0
  • Bit_score: 101
  • Evalue 2.70e-19
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 100
  • Evalue 3.00e+00

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Taxonomy

R_OD1_56_20 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAAGCTGTTTCTTGAAGAATTCGAACTGAACAGGCTCGCCCGCCGCATGCAGAAAGGCGATCGGGACGCCGCGGAAAAGCTCTACGCCAAACTCTCGGACCGGGTGTACGGCTTCTGCATGAACCGCGTAGGCAACCCGCACCTCGCCGAAGACATCATGCAGGATATTTTTGTGAAGCTCGTGGAGCACGTGGAAACGTTCGAGCGTGGGAAAGGGACATTTTCCGCATGGTTCTGGCAGCTTGCGCGGAACACCGTGATCGATCACTACCGGAAAAAACGAGAGACCGCGTTCTCTGACATGCCTGATGGAACGGTAGAAGCGAGCGCAACACACGAGCCGCATGAATTCTTGAACCATAAGTGGGAATACGAGCGCGTGCGGGGAGCGCTGAAGACGCTCGACCGCGAAGAACAAGAACTTTTTGAGCTTCGCTTCGTCGTGGAACTTTCTTATAAAGAGATCGCGAGCGTGCTCGGAAAGTCCGAGGGCGCGCTCCGCGTGGCAACGAACCGCCTCAAGAGCAAGATCCGTACCTCACTCGCATGA
PROTEIN sequence
Length: 184
MKLFLEEFELNRLARRMQKGDRDAAEKLYAKLSDRVYGFCMNRVGNPHLAEDIMQDIFVKLVEHVETFERGKGTFSAWFWQLARNTVIDHYRKKRETAFSDMPDGTVEASATHEPHEFLNHKWEYERVRGALKTLDREEQELFELRFVVELSYKEIASVLGKSEGALRVATNRLKSKIRTSLA*