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GWB1_scaffold_7902_15

Organism: GWB1_PER_54_5

partial RP 37 / 55 MC: 4 BSCG 37 / 51 MC: 3 ASCG 6 / 38
Location: comp(12866..14305)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RpoD family RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFOXYB2_FULL_PER_ii_54_17_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 479.0
  • Bit_score: 925
  • Evalue 4.30e-266
rpoD; RpoD family RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 400.0
  • Bit_score: 380
  • Evalue 8.00e-103
RNA polymerase, sigma 70 subunit, RpoD similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 389
  • Evalue 1.00e+00

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Taxonomy

RIFOXYB2_FULL_PER_ii_54_17_curated → PER-ii → Bacteria

Sequences

DNA sequence
Length: 1440
ATGGCTTCCCATCCGCGAAAATTCATTGCGCAACCCACCGATGACGATCTCAAAGGGTTGCCAGACGCCGTGAAGCATCTCATAAAGAAAGGGCGTGAGCAGCGGTATGTCACACATCAGGAGATTATGCAGGTGGTTCCCAATGCAGAACTGAACGTCGATTTGCTCGATGAAATCTACACGCTGCTCGTGGATCTTGGTATTCAGGTGATCGATGTGAAGGATGCGCTGATCTGGGAGAAGAAGAGCAAGTCTGATCTCGGGGAGCCGGTAGAGGATCTTACGGATGTTGCCACGTTCGATGAAACTGATATTGATACGGATACTGATACAGATGAAGATGCATTGGAGACTGAGGCGGAAGGGAAAGTGGATACAGTGAGTGATGCCGATGATGACGCGCTCGATGTGATCGCCACAGCCGGCATTGCCATCGATGACAAGGAAATTTCAGAAGAGGAGAAAGGGAAACGCCGTCGTGAACGGGAGATTGATCTTCTGGAGATCAGCAATGACTCCGTACGCATGTACCTTTCGGAAATTGGCCGTGTCCCGCTCATCGATGCCAAGAAGGAAGTGGAACTGGCACGGCGCATTCGCAAAGGTGATGCATCCGCGAAGCAGCAGCTGGCGGAAGCAAATCTGCGTCTCGTGGTCAGCATCGCGAAGAAGTACATTGGTCGTGGTCTCTCTTTCCTCGATCTTATCCAGGAGGGAAATATCGGTCTGTTCCGTGCAGTGGAGAAATTCGATCCGGAGCGCGGATTCAAGTTCTCCACATATGCGACGTGGTGGATCCGCCAGGCTATCACCCGTGCTATTGCGGATCAGGCGCGCACCATCCGTATCCCCGTCCACATGGTGGAAACCATCAACAAGCTCACACACACGCAGCGCCGCCTGGTGCAGGAGCTCGGTCGGGAGCCGACTGTGGAAGAGCTTTCCGTTGAAATGGAAATGGATGTGAAGAAAGTGCGTCATATCCAGAAGATCAGCCAGGACATCATCTCGCTCGAGTCTCCGGTGGGGAGCGAGGAAGACAGCAAGCTCGGTGATTTCATTGAAGATGAGGAAGCGATCAATCCGTTCGATGCCACAAACCGGCAACTCCGCAAGGAGAATGTGCACTCCATGCTGGAGTTCCTCACGCCGCGCGAGCGCAAAATTATCGAAATGCGGTTCGGTCTGAATGACGGCATCGGGCACACGTTGGAAGAAGTGGGCAAGGAGTTCGGTGTCACCCGGGAGCGCATTCGTCAAATCGAGGCGAAGGTTCTGCAGAAAATGAGGGATCATCCCCGTTCCATGACCATTCGTGAGCATGGCGGAGCCCCCAAGCGCGTCGGGTTCACCCCGAGCAGTCCGTTCTTCGATACGGATGGTTCATTGGAGAATTTACTCCGGAAGGATCTGGGAGGGGAAAGGAAAAAAGCGGCATAG
PROTEIN sequence
Length: 480
MASHPRKFIAQPTDDDLKGLPDAVKHLIKKGREQRYVTHQEIMQVVPNAELNVDLLDEIYTLLVDLGIQVIDVKDALIWEKKSKSDLGEPVEDLTDVATFDETDIDTDTDTDEDALETEAEGKVDTVSDADDDALDVIATAGIAIDDKEISEEEKGKRRREREIDLLEISNDSVRMYLSEIGRVPLIDAKKEVELARRIRKGDASAKQQLAEANLRLVVSIAKKYIGRGLSFLDLIQEGNIGLFRAVEKFDPERGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLTHTQRRLVQELGREPTVEELSVEMEMDVKKVRHIQKISQDIISLESPVGSEEDSKLGDFIEDEEAINPFDATNRQLRKENVHSMLEFLTPRERKIIEMRFGLNDGIGHTLEEVGKEFGVTRERIRQIEAKVLQKMRDHPRSMTIREHGGAPKRVGFTPSSPFFDTDGSLENLLRKDLGGERKKAA*