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GWB1_scaffold_10098_4

Organism: GWB1_OD1_41_4_partial

partial RP 31 / 55 MC: 1 BSCG 36 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(1395..1988)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKS07192.1}; TaxID=1618867 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_4.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 390
  • Evalue 1.60e-105
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 185.0
  • Bit_score: 106
  • Evalue 7.00e-21
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 108
  • Evalue 1.00e+00

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Taxonomy

Parcubacteria bacterium GW2011_GWB1_41_4 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGCACATGATAAGAATGGATAATGGTTTGATAAAATTAAAACAAATGGAATTTTTAAAAAAATTGACTGACGAACAGGTTGCAGAATACGTTCGGACAGAAAATCCGGAGGCTTACGGCGAGATTATGCAGAGATATCAGGCCAAACTTATCAGATATGCCAACTATTTGATTCGCAACGACACGGAAGCAGCCGATGTGGTCCAGGGTTCTTTGATCAAGGCATTTGCTAATTTAAATAGCTTCGATGCCAAGAAAAAATTTTCTTCTTGGATTTATCGTATCGTACACAATGAAGCTATTAACATTCTTTCTAAACGCAAAAATGAATTACCAATATTAGAAGACATGGATTTCGAGAATAATGATAATATTGAAGCGGATTTTGTCAGGGAAGAAACGCGAGCGGAGGTACATGACTGTCTTTCAAAGATGTCGCTTTTGTACGCTGAGCCGCTATCGCTTCATTTTCTTGAAGGCAGATCATATGATGAAATTAGCGATATCTTACGATTACCGATCAGCACAATTGGAACGCGAATTAATCGAGCTAAAGTTTTAATGAAAAAAATATGTCAAAAAATCAAAAAATAG
PROTEIN sequence
Length: 198
MHMIRMDNGLIKLKQMEFLKKLTDEQVAEYVRTENPEAYGEIMQRYQAKLIRYANYLIRNDTEAADVVQGSLIKAFANLNSFDAKKKFSSWIYRIVHNEAINILSKRKNELPILEDMDFENNDNIEADFVREETRAEVHDCLSKMSLLYAEPLSLHFLEGRSYDEISDILRLPISTIGTRINRAKVLMKKICQKIKK*