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gwa2_scaffold_140

Alias: zPERA2_38_36_4

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Displaying items 31-60 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_140_31
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(33987..34604)
DNA (618bp) protein (206aa)
Phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide formyltransferase 1 {ECO:0000313|EMBL:KKR05199.1}; EC=2.1.2.2 {ECO:0000313|EMBL:KKR05199.1};; TaxID=1619062 species="Bacteria; Pe
Phosphoribosylglycinamide formyltransferase n=1 Tax=Thermotoga lettingae TMO RepID=A8F8I0_THELT
hypothetical protein
Formyltransferase (db=superfamily db_id=SSF53328 from=2 to=199 evalue=1.2e-51 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
gwa2_scaffold_140_32
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(34626..35531)
DNA (906bp) protein (302aa)
L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=7 Tax=Thermoanaerobacteraceae RepID=B0K922_THEP3
L-serine dehydratase, iron-sulfur-dependent, alpha subunit Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=174 to=190)
gwa2_scaffold_140_33
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(35531..36211)
DNA (681bp) protein (227aa)
L-serine dehydratase, iron-sulfur-dependent subunit beta, L-serine dehydratase {ECO:0000313|EMBL:KKR05201.1}; EC=4.3.1.17 {ECO:0000313|EMBL:KKR05201.1};; TaxID=1619062 species="Bacteria; Peregrinibact
sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7LY16_9CLOT
seg (db=Seg db_id=seg from=122 to=130)
gwa2_scaffold_140_34
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

36785..37210
DNA (426bp) protein (142aa)
Lipoprotein signal peptidase n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9S2Z9_THEOJ
Lipoprotein signal peptidase Tax=zPERA2_38_36
lipoprotein signal peptidase
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
gwa2_scaffold_140_35
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

37232..37921
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05203.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=57 to=70)
gwa2_scaffold_140_36
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

37923..38696
DNA (774bp) protein (258aa)
Coenzyme F420-0 gamma-glutamyl ligase {ECO:0000313|EMBL:KKR05204.1}; EC=6.3.2.- {ECO:0000313|EMBL:KKR05204.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacteriu
coenzyme F420-0 gamma-glutamyl ligase (EC:6.3.2.-)
Coenzyme F420-0 gamma-glutamyl ligase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46A57_METBF
seg (db=Seg db_id=seg from=40 to=52)
gwa2_scaffold_140_37
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(38693..39196)
DNA (504bp) protein (168aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=69 to=78)
gwa2_scaffold_140_38
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

39291..40505
DNA (1215bp) protein (405aa)
Cell division protein FtsW n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHH9_9CHLR
Cell division protein FtsW, cell division protein FtsW {ECO:0000313|EMBL:KKR05206.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
ftsW; cell division protein FtsW
FTSW_RODA_SPOVE (db=PatternScan db_id=PS00428 from=335 to=359 evalue=0.0 interpro_id=IPR018365 interpro_description=Cell cycle, FtsW / RodA / SpoVE, conserved site GO=Biological Process: cell cycle (GO:0007049), Cellular Component: integral to membrane (GO:0016021))
gwa2_scaffold_140_39
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

40666..41514
DNA (849bp) protein (283aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFF3A
UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase Tax=zPERA2_38_36
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
(db=HMMPfam db_id=PF04101 from=109 to=270 evalue=1.4e-22 interpro_id=IPR007235 interpro_description=Glycosyl transferase, family 28, C-terminal GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758), Molecular Function: carbohydrate binding (GO:0030246), Biological Process: lipid glycosylation (GO:0030259))
gwa2_scaffold_140_40
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

41534..41764
DNA (231bp) protein (77aa)
transmembrane_regions Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
gwa2_scaffold_140_41
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

41761..42348
DNA (588bp) protein (196aa)
transmembrane_regions Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
gwa2_scaffold_140_42
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

42356..42835
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05210.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
LemA-like (db=superfamily db_id=SSF140478 from=26 to=159 evalue=2.7e-09 interpro_id=IPR023353 interpro_description=LemA-like domain)
(db=HMMPfam db_id=PF04011 from=4 to=144 evalue=6.7e-10 interpro_id=IPR007156 interpro_description=LemA)
gwa2_scaffold_140_43
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

43015..43674
DNA (660bp) protein (220aa)
LexA family transcriptional repressor, repressor LexA {ECO:0000313|EMBL:KKR05211.1}; EC=3.4.21.88 {ECO:0000313|EMBL:KKR05211.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrin
LexA repressor n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUB4_9BACT
SOS regulatory protein LexA
LEXASERPTASE (db=FPrintScan db_id=PR00726 from=132 to=142 evalue=1.6e-08 interpro_id=IPR006197 interpro_description=Peptidase S24, LexA-like GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
gwa2_scaffold_140_44
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(44127..44870)
DNA (744bp) protein (248aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=89 to=105)
gwa2_scaffold_140_45
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

44990..46195
DNA (1206bp) protein (402aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05213.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwa2_scaffold_140_46
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

46451..47110
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U510_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKR05214.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
DedA protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
gwa2_scaffold_140_47
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(47140..47499)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Thermus RepID=H9ZQ28_THETH
Uncharacterized protein {ECO:0000313|EMBL:KKR05215.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
seg (db=Seg db_id=seg from=103 to=114)
gwa2_scaffold_140_48
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(47492..47788)
DNA (297bp) protein (99aa)
DNA polymerase beta domain protein region n=1 Tax=Archaeoglobus veneficus SNP6 RepID=F2KN03_ARCVS
Polymerase beta domain-containing protein {ECO:0000313|EMBL:KKR05216.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
DNA polymerase beta domain-containing protein
seg (db=Seg db_id=seg from=78 to=89)
gwa2_scaffold_140_49
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

47901..48863
DNA (963bp) protein (321aa)
Putative phytochrome sensor protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TM71_9CHLR
Putative phytochrome sensor protein Tax=zPERA2_38_36
PAS domain S-box
seg (db=Seg db_id=seg from=140 to=149)
gwa2_scaffold_140_50
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(48907..50793)
DNA (1887bp) protein (629aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N6B3_ANATU
Uncharacterized protein {ECO:0000313|EMBL:KKR05218.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
GDP-mannose 4,6 dehydratase ISS
coiled-coil (db=Coil db_id=coil from=64 to=85 evalue=NA)
gwa2_scaffold_140_51
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(50793..52427)
DNA (1635bp) protein (545aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05219.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
coiled-coil (db=Coil db_id=coil from=323 to=344 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
seg (db=Seg db_id=seg from=3 to=9)
gwa2_scaffold_140_52
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists


52524..54311
DNA (1788bp) protein (596aa)
Alanyl-tRNA synthetase, alanyl-tRNA synthetase {ECO:0000313|EMBL:KKR05220.1}; EC=6.1.1.7 {ECO:0000313|EMBL:KKR05220.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria
Alanine--tRNA ligase n=1 Tax=Spirochaeta caldaria DSM 7334 RepID=F8F1L9_SPICH rbh
alanyl-tRNA synthetase
coiled-coil (db=Coil db_id=coil from=343 to=375 evalue=NA)
gwa2_scaffold_140_53
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

54368..54487
DNA (120bp) protein (40aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05221.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwa2_scaffold_140_54
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

54489..56387
DNA (1899bp) protein (633aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05222.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwa2_scaffold_140_55
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(56406..57782)
DNA (1377bp) protein (459aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2ZDI2_9FIRM rbh
MiaB family RNA modification protein, bifunctional enzyme involved in thiolation and methylation of tRNA {ECO:0000313|EMBL:KKR05223.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Pe
2-methylthioadenine synthetase
MTTASE_RADICAL (db=PatternScan db_id=PS01278 from=149 to=169 evalue=0.0 interpro_id=IPR020612 interpro_description=Methylthiotransferase, conserved site GO=Cellular Component: cellular_component (GO:0005575), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
gwa2_scaffold_140_56
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

57941..58510
DNA (570bp) protein (190aa)
transmembrane_regions Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=163)
gwa2_scaffold_140_57
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

58670..59125
DNA (456bp) protein (152aa)
Phage shock protein C, PspC n=1 Tax=Desulfitobacterium dichloroeliminans LMG P-21439 RepID=H1IBC1_9FIRM
Phage shock protein C, PspC Tax=zPERA2_38_36
stress-responsive transcriptional regulator
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
gwa2_scaffold_140_58
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(59060..59608)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U967_HYDS0
Putative uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
(db=HMMPfam db_id=PF01936 from=11 to=151 evalue=5.5e-23 interpro_id=IPR021139 interpro_description=NYN domain, limkain-b1-type)
gwa2_scaffold_140_59
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(60151..60801)
DNA (651bp) protein (217aa)
Zn-dependent hydrolase n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9S0N6_THEOJ
Zn-dependent hydrolase Tax=zPERA2_38_36
Zn-dependent hydrolase of the beta-lactamase fold-like protein
seg (db=Seg db_id=seg from=149 to=161)
gwa2_scaffold_140_60
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

60935..62212
DNA (1278bp) protein (426aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L4L8_9BACI rbh
Enolase {ECO:0000313|EMBL:KKQ71825.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
ENOLASE (db=PatternScan db_id=PS00164 from=335 to=348 evalue=0.0 interpro_id=IPR020809 interpro_description=Enolase, conserved site GO=Cellular Component: phosphopyruvate hydratase complex (GO:0000015), Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: phosphopyruvate hydratase activity (GO:0004634), Biological Process: glycolysis (GO:0006096))
Displaying items 31-60 of 104 in total

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