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gwa2_scaffold_412

Alias: zPERA2_38_36_6

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Displaying items 61-90 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_412_61
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

70830..71960
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C528_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KKR06610.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
gwa2_scaffold_412_62
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(72006..73313)
DNA (1308bp) protein (436aa)
tRNA nucleotidyltransferase/poly(A) polymerase, poly(A) polymerase {ECO:0000313|EMBL:KKR06611.1}; EC=2.7.7.19 {ECO:0000313|EMBL:KKR06611.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" sour
tRNA adenylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL9_9BACT rbh
tRNA nucleotidyltransferase/poly(A) polymerase
POLY(A) POLYMERASE (db=HMMPanther db_id=PTHR13734:SF5 from=35 to=228 evalue=1.0e-74 interpro_id=IPR010206 interpro_description=Poly(A) polymerase, PcnB GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652), Biological Process: mRNA polyadenylation (GO:0006378))
gwa2_scaffold_412_63
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

73436..74257
DNA (822bp) protein (274aa)
Tax=zPERA2_38_36
gwa2_scaffold_412_64
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

74276..74836
DNA (561bp) protein (187aa)
Putative manganese efflux pump MntP n=3 Tax=Cyanothece RepID=MNTP_CYAA5
Putative manganese efflux pump MntP Tax=zPERA2_38_36
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
gwa2_scaffold_412_65
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists


74851..75930
DNA (1080bp) protein (360aa)
Glycoprotease family metalloendopeptidase, O-sialoglycoprotein endopeptidase {ECO:0000313|EMBL:KKR06614.1}; EC=3.4.24.57 {ECO:0000313|EMBL:KKR06614.1};; TaxID=1619062 species="Bacteria; Peregrinibacte
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RJ53_HALSL rbh
glycoprotease family metalloendopeptidase
seg (db=Seg db_id=seg from=84 to=89)
gwa2_scaffold_412_66
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(75860..76222)
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06615.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=71)
gwa2_scaffold_412_67
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists


76429..77778
DNA (1350bp) protein (450aa)
Histidine--tRNA ligase n=5 Tax=Dehalococcoides mccartyi RepID=SYH_DEHE1 rbh
Histidine-tRNA ligase {ECO:0000313|EMBL:KKQ71476.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
histidyl-tRNA synthetase
hisS: histidyl-tRNA synthetase (db=HMMTigr db_id=TIGR00442 from=17 to=422 evalue=1.2e-187 interpro_id=IPR015807 interpro_description=Histidyl-tRNA synthetase, class IIa, subgroup GO=Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
gwa2_scaffold_412_68
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

77801..79198
DNA (1398bp) protein (466aa)
Cellulosome-anchoring protein n=1 Tax=sediment metagenome RepID=D9PNH4_9ZZZZ
Oligopeptide ABC transporter substrate binding protein {ECO:0000313|EMBL:KKR06617.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
gwa2_scaffold_412_69
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(79200..79619)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0Z7L7_DICPU
Uncharacterized protein {ECO:0000313|EMBL:KKR06618.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
coiled-coil (db=Coil db_id=coil from=55 to=108 evalue=NA)
seg (db=Seg db_id=seg from=58 to=70)
gwa2_scaffold_412_70
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(79621..80826)
DNA (1206bp) protein (402aa)
Tax=zPERA2_38_36
gwa2_scaffold_412_71
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(80912..81241)
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06620.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwa2_scaffold_412_72
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(81273..85667)
DNA (4395bp) protein (1465aa)
Cna B domain protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UD85_9CYAN
Cna B domain protein Tax=zPERA2_38_36
allergen V5/Tpx-1-like protein
coiled-coil (db=Coil db_id=coil from=512 to=540 evalue=NA)
gwa2_scaffold_412_73
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(85698..86066)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06622.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwa2_scaffold_412_74
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

86163..87296
DNA (1134bp) protein (378aa)
Malic enzyme, malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:KKR06623.1}; EC=1.1.1.38 {ECO:0000313|EMBL:KKR06623.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" sourc
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=5 Tax=Clostridium botulinum RepID=A5HYD9_CLOBH rbh
malate dehydrogenase
MALIC_ENZYMES (db=PatternScan db_id=PS00331 from=157 to=173 evalue=0.0 interpro_id=IPR015884 interpro_description=Malic enzyme, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation-reduction process (GO:0055114))
gwa2_scaffold_412_75
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

87505..88281
DNA (777bp) protein (259aa)
Probable transcriptional regulatory protein Hore_12350 n=1 Tax=Halothermothrix orenii H 168 RepID=Y1235_HALOH
transcriptional regulator Tax=zPERA2_38_36
hypothetical protein
seg (db=Seg db_id=seg from=147 to=159)
gwa2_scaffold_412_76
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(88282..89880)
DNA (1599bp) protein (533aa)
MgpA protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YEH7_DICT6
MgpA protein, phosphoesterase RecJ domain-containing protein {ECO:0000313|EMBL:KKR06625.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.
MgpA protein
coiled-coil (db=Coil db_id=coil from=423 to=444 evalue=NA)
gwa2_scaffold_412_77
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(90069..91331)
DNA (1263bp) protein (421aa)
transmembrane_regions Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=4 to=29)
gwa2_scaffold_412_78
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(91388..92941)
DNA (1554bp) protein (518aa)
exonuclease RecJ (EC:3.1.-.-)
Exonuclease RecJ n=1 Tax=Clostridium clariflavum DSM 19732 RepID=G8M330_CLOCD rbh
Exonuclease RecJ Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
gwa2_scaffold_412_79
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(93107..93514)
DNA (408bp) protein (136aa)
Protein containing tetrapyrrole methyltransferase domain and MazG-like (Predicted pyrophosphatase) domain n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAT1_ELUMP
Uncharacterized protein {ECO:0000313|EMBL:KKQ71488.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
tetrapyrrole methyltransferase domain-containing/MazG-like domain-containing protein
all-alpha NTP pyrophosphatases (db=superfamily db_id=SSF101386 from=1 to=107 evalue=2.3e-20)
gwa2_scaffold_412_80
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(93553..94104)
DNA (552bp) protein (184aa)
Retron-type reverse transcriptase n=1 Tax=Caloramator australicus RC3 RepID=I7J4R1_9CLOT
Retron-type reverse transcriptase Tax=zPERA2_38_36
RNA-directed DNA polymerase
seg (db=Seg db_id=seg from=133 to=152)
gwa2_scaffold_412_81
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(94121..94585)
DNA (465bp) protein (155aa)
RNA-directed DNA polymerase n=1 Tax=Prevotella sp. oral taxon 306 str. F0472 RepID=I0TDA1_9BACT
RNA-directed DNA polymerase Tax=zPERA2_38_36
Retron-type reverse transcriptase
seg (db=Seg db_id=seg from=126 to=134)
gwa2_scaffold_412_82
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

94698..94913
DNA (216bp) protein (72aa)
Tax=zPERA2_38_36
gwa2_scaffold_412_83
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(95326..96480)
DNA (1155bp) protein (385aa)
Tax=zPERA2_38_36
gwa2_scaffold_412_84
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(96617..97531)
DNA (915bp) protein (305aa)
tRNA delta(2)-isopentenylpyrophosphate transferase, tRNA dimethylallyltransferase {ECO:0000313|EMBL:KKR06633.1}; EC=2.5.1.75 {ECO:0000313|EMBL:KKR06633.1};; TaxID=1619062 species="Bacteria; Peregrinib
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SPB9_9FIRM
(db=HMMPfam db_id=PF01715 from=51 to=296 evalue=1.8e-68 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
gwa2_scaffold_412_85
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

97606..98226
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06634.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwa2_scaffold_412_86
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists


98347..99024
DNA (678bp) protein (226aa)
50S ribosomal protein L10 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGC4_9FIRM
50S ribosomal protein L10, large subunit ribosomal protein L10 {ECO:0000313|EMBL:KKR06635.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_1
50S ribosomal protein L10
seg (db=Seg db_id=seg from=177 to=225)
gwa2_scaffold_412_87
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists


99079..99453
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQK1_9FIRM
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KKQ71496.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
50S ribosomal protein L7/L12
seg (db=Seg db_id=seg from=38 to=56)
gwa2_scaffold_412_88
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

99563..100546
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06637.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=2 to=18)
gwa2_scaffold_412_89
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

100643..102004
DNA (1362bp) protein (454aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06638.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=126)
seg (db=Seg db_id=seg from=347 to=358)
gwa2_scaffold_412_90
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

102006..102629
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06639.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
Displaying items 61-90 of 108 in total

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