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gwa2_scaffold_510

Alias: zPERA2_38_36_7

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Displaying items 31-60 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_510_31
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(31205..31525)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05888.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
gwa2_scaffold_510_32
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

32117..32581
DNA (465bp) protein (155aa)
Guanine deaminase, guanine deaminase {ECO:0000313|EMBL:KKR05889.1}; EC=3.5.4.3 {ECO:0000313|EMBL:KKR05889.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium
CMP/dCMP deaminase zinc-binding n=6 Tax=Clostridium thermocellum RepID=C7HGY6_CLOTM
CMP/dCMP deaminase zinc-binding protein
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=51 to=88 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
gwa2_scaffold_510_33
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

32595..33236
DNA (642bp) protein (214aa)
Peptidase M50 n=2 Tax=Thermoanaerobacterium RepID=F6BLK2_THEXL
Peptidase M50 {ECO:0000313|EMBL:KKR05890.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwa2_scaffold_510_34
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(33412..33678)
DNA (267bp) protein (89aa)
Tax=zPERA2_38_36
gwa2_scaffold_510_35
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

33794..34135
DNA (342bp) protein (114aa)
Addiction module killer protein Tax=zPERA2_38_36
(db=HMMPfam db_id=PF05973 from=18 to=111 evalue=1.8e-14 interpro_id=IPR009241 interpro_description=Addiction module killer protein)
gwa2_scaffold_510_36
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

34153..34593
DNA (441bp) protein (147aa)
Helix-turn-helix domain protein n=1 Tax=Halanaerobium praevalens DSM 2228 RepID=E3DLH3_HALPG
Helix-turn-helix domain protein Tax=zPERA2_38_36
helix-turn-helix domain-containing protein
seg (db=Seg db_id=seg from=3 to=23)
gwa2_scaffold_510_37
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

34616..34906
DNA (291bp) protein (97aa)
Bacteriophage 92, 0rf53 Tax=zPERA2_38_36
(db=HMMPfam db_id=PF11950 from=3 to=75 evalue=2.8e-07 interpro_id=IPR021857 interpro_description=Bacteriophage 92, 0rf53)
gwa2_scaffold_510_38
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

35468..36757
DNA (1290bp) protein (430aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Frankia sp. EuI1c RepID=E3JA14_FRASU
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:KKR05895.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
phosphoesterase PA-phosphatase-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwa2_scaffold_510_39
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

36800..37396
DNA (597bp) protein (199aa)
Spore germination protein-like protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262598E
Uncharacterized protein {ECO:0000313|EMBL:KKR05896.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=5 to=24)
gwa2_scaffold_510_40
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(37393..38070)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB36_THET1 rbh
Putative uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
gwa2_scaffold_510_41
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(38401..39396)
DNA (996bp) protein (332aa)
Tax=zPERA2_38_36
gwa2_scaffold_510_42
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

39508..39933
DNA (426bp) protein (142aa)
Cytochrome b5 n=1 Tax=Spirochaeta thermophila DSM 6578 RepID=G0GAP0_SPITZ
Cytochrome b5 Tax=zPERA2_38_36
soluble cytochrome b558
CYTOCHROME_B5_1 (db=PatternScan db_id=PS00191 from=98 to=105 evalue=0.0 interpro_id=IPR018506 interpro_description=Cytochrome b5, heme-binding site GO=Molecular Function: heme binding (GO:0020037))
gwa2_scaffold_510_43
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

39930..40160
DNA (231bp) protein (77aa)
transmembrane_regions Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
seg (db=Seg db_id=seg from=19 to=33)
gwa2_scaffold_510_44
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(40157..41761)
DNA (1605bp) protein (535aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=67 to=80)
gwa2_scaffold_510_45
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

41847..42320
DNA (474bp) protein (158aa)
SsrA-binding protein n=2 Tax=Geobacter RepID=SSRP_GEOUR
SsrA-binding protein {ECO:0000313|EMBL:KKQ71321.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
smpB; SsrA-binding protein
SSRP (db=PatternScan db_id=PS01317 from=30 to=42 evalue=0.0 interpro_id=IPR020081 interpro_description=SsrA-binding protein, conserved site)
gwa2_scaffold_510_46
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

42344..43105
DNA (762bp) protein (254aa)
NH(3)-dependent NAD(+) synthetase, NAD+ synthase {ECO:0000313|EMBL:KKR05903.1}; EC=6.3.1.5 {ECO:0000313|EMBL:KKR05903.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacter
nadE; NAD+ synthase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Methanohalophilus mahii DSM 5219 RepID=D5E8C6_METMS
nadE: NAD+ synthetase (db=HMMTigr db_id=TIGR00552 from=2 to=253 evalue=1.3e-65 interpro_id=IPR003694 interpro_description=NAD synthase GO=Molecular Function: NAD+ synthase (glutamine-hydrolyzing) activity (GO:0003952), Molecular Function: ATP binding (GO:0005524), Biological Process: NAD biosynthetic process (GO:0009435))
gwa2_scaffold_510_47
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

43102..43620
DNA (519bp) protein (173aa)
Nicotinamide-nucleotide adenylyltransferase n=8 Tax=Thermococcus RepID=NADM_PYRKO
Nicotinamide-nucleotide adenylyltransferase Tax=zPERA2_38_36
nicotinamide-nucleotide adenylyltransferase
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=9 to=172 evalue=1.7e-25)
gwa2_scaffold_510_48
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

43626..45074
DNA (1449bp) protein (483aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphomannomutase / phosphoglucomutase {ECO:0000313|EMBL:KKR05905.1}; EC=5.4.2.8 {ECO:0000313|EMBL:KKR05905.1};; TaxID=1619062 species
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Thermodesulfatator indicus DSM 15286 RepID=F8ADQ5_THEID rbh
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
coiled-coil (db=Coil db_id=coil from=232 to=253 evalue=NA)
gwa2_scaffold_510_49
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

45071..46684
DNA (1614bp) protein (538aa)
hypothetical protein cdiviTM7_00321 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25AF
Uncharacterized protein {ECO:0000313|EMBL:KKR05906.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=104 to=132 evalue=NA)
gwa2_scaffold_510_50
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(46687..48990)
DNA (2304bp) protein (768aa)
Topoisomerase I, DNA topoisomerase I protein {ECO:0000313|EMBL:KKR05907.1}; EC=5.99.1.2 {ECO:0000313|EMBL:KKR05907.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=2 Tax=Geobacter RepID=A5G7S4_GEOUR rbh
topA_bact: DNA topoisomerase I (db=HMMTigr db_id=TIGR01051 from=21 to=639 evalue=0.0 interpro_id=IPR005733 interpro_description=DNA topoisomerase I, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
gwa2_scaffold_510_51
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

49059..49463
DNA (405bp) protein (135aa)
Transcription regulator PadR N-terminal Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=57 to=72)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=40 to=126 evalue=0.00081 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
(db=HMMPfam db_id=PF03551 from=44 to=110 evalue=4.1e-09 interpro_id=IPR005149 interpro_description=Transcription regulator PadR N-terminal)
gwa2_scaffold_510_52
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

49684..49959
DNA (276bp) protein (92aa)
Gp04 n=4 Tax=root RepID=Q6QIE5_9CAUD
HU DNA-binding protein, DNA-binding protein HU-beta {ECO:0000313|EMBL:KKR05909.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
BcepMu4; HU DNA-binding protein
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
gwa2_scaffold_510_53
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists


50251..51291
DNA (1041bp) protein (347aa)
Phenylalanine--tRNA ligase alpha subunit n=3 Tax=Clostridium RepID=B8I1X0_CLOCE rbh
Phenylalanine-tRNA ligase alpha subunit {ECO:0000313|EMBL:KKQ71329.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
phenylalanyl-tRNA synthetase subunit alpha
coiled-coil (db=Coil db_id=coil from=2 to=23 evalue=NA)
gwa2_scaffold_510_54
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

51292..54054
DNA (2763bp) protein (921aa)
Phenylalanyl-tRNA synthetase subunit beta, phenylalanyl-tRNA synthetase beta chain {ECO:0000313|EMBL:KKR05911.1}; EC=6.1.1.20 {ECO:0000313|EMBL:KKR05911.1};; TaxID=1619062 species="Bacteria; Peregrini
Phenylalanine--tRNA ligase beta subunit n=3 Tax=Clostridium RepID=B8I1X1_CLOCE rbh
phenylalanyl-tRNA synthetase subunit beta
seg (db=Seg db_id=seg from=172 to=181)
gwa2_scaffold_510_55
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

54066..56864
DNA (2799bp) protein (933aa)
Glycosyl transferase family protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ICQ5_9CHLR rbh
Glycosyl transferase family protein Tax=zPERA2_38_36
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwa2_scaffold_510_56
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(57090..57449)
DNA (360bp) protein (120aa)
Uncharacterized protein n=6 Tax=Vibrionales RepID=F9SKK1_VIBSP
hypothetical protein Tax=PER_GWF2_38_29
hypothetical protein
(db=HMMPfam db_id=PF01936 from=6 to=80 evalue=2.9e-11 interpro_id=IPR021139 interpro_description=NYN domain, limkain-b1-type)
gwa2_scaffold_510_57
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(57655..58524)
DNA (870bp) protein (290aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=40 to=48)
gwa2_scaffold_510_58
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(58579..59121)
DNA (543bp) protein (181aa)
Putative Fe-only hydrogenase n=1 Tax=uncultured archaeon RepID=D1JG51_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKR05915.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwa2_scaffold_510_59
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

59168..60328
DNA (1161bp) protein (387aa)
NADP-reducing hydrogenase, subunit D, putative n=7 Tax=Thermotoga RepID=Q9WY44_THEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKQ71335.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
NADP-reducing hydrogenase, subunit D
(db=HMMPfam db_id=PF02906 from=5 to=313 evalue=1.6e-98 interpro_id=IPR004108 interpro_description=Iron hydrogenase, large subunit, C-terminal)
gwa2_scaffold_510_60
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(60309..60839)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEW0_PETMO
Uncharacterized protein {ECO:0000313|EMBL:KKR05917.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Displaying items 31-60 of 81 in total

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