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gwc2_scaffold_11_40

Organism: GWC2_OD1_35_28

partial RP 32 / 55 MC: 1 BSCG 36 / 51 ASCG 8 / 38 MC: 1
Location: 42500..43072

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor, RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:KKP77092.1}; TaxID=1618629 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbel UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 381
  • Evalue 9.20e-103
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily alias=ACD8_C00017G00020,ACD8_2175.29172.21G0020,ACD8_2175.29172.21_20 id=136902 tax=ACD8 species=Chlorobaculum tepidum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 179.0
  • Bit_score: 221
  • Evalue 8.60e-55
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 183.0
  • Bit_score: 184
  • Evalue 2.60e-44

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Taxonomy

GWC1_OD1_35_31 → Campbellbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGGATGATTCTCAAAAAACTGATGAAGAATTGGTCGCTTTGTCCCTGCAAAACAGAGATTTTTTTGCCTACATCGTAGATCGCTACGAGGAAAAACTTTTTCGCTACATAAAAAGAATTACAAATTTAAGAAAAGATGATTTACCGGATATTCTTCAAGATGTTTTTATAAAAGTTTATCAAAATTTAAATGATTATGATTCAAATTTAAGTTTCTCTTCTTGGATCTATAGAATTGCTCATAATCAAGTAATTGATAATTATAGAAAAAATAAATCTCGTCCTCAGGGAAATTATATAGATGTAGATGATAAAATTTTAGAGAATATTGTAAATGATTTTGACTTTATTAAAGACATTGATTTAAAATATTTAAAAGTGCATATTCAGGAAATTTTGGAAAAATTGGACGAAAAATATCGTGAAATTTTAATACTAAAATTTTTTGAGCAAAAAGATTACAAAGAAATTTCTGATATTTTAAAAAAACCAATGGGGACTGTCGCAACACTAATCAATCGAGCAAAGAAACAATTTAAAGAAGAATTTGAAAAAACAAACATAAAATTATAA
PROTEIN sequence
Length: 191
MDDSQKTDEELVALSLQNRDFFAYIVDRYEEKLFRYIKRITNLRKDDLPDILQDVFIKVYQNLNDYDSNLSFSSWIYRIAHNQVIDNYRKNKSRPQGNYIDVDDKILENIVNDFDFIKDIDLKYLKVHIQEILEKLDEKYREILILKFFEQKDYKEISDILKKPMGTVATLINRAKKQFKEEFEKTNIKL*