ggKbase home page

gwc1_scaffold_918_5

Organism: GWC1_OD1_35_21

near complete RP 38 / 55 BSCG 42 / 51 ASCG 11 / 38
Location: 3140..6256

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 999.99
  • Bit_score: 1112
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKP75547.1}; TaxID=1618892 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_35_21.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2042
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 1111
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWC1_35_21 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3117
ATGCAAACAGAAAAACGTCCGAAAAAATATTTTTCAAGGTATAAAAACCCGCTAATAGAATTTCCGAATTTAATAGAAGCTCAAACTAAATCCTATAAATGGCTGGTAGAAGAGGGTTTAAAAGAAGTTTTTAAAGAATTTTCTCCAATCATAGATTACTCTGGGAAAAAATTTGAACTTGAATTTACCTCCTTTTCTCTGAGCGAACCGAACTGCGAAGAAAATGACGCTAAAATAAATAAACTATCGTATCAAGGGCTCCTTAAAACTCGGGTAAAATTAACGAACAAAATATTAGGTACGGTTAAAGAACAGGAGATTTTTATGTCAGAAATTCCCTTAATGACCCCGCACGGAACTTTCATTATAAATGGGGTGGAACGTGTTATTGTTCCTCAGCTGGCACGTTCTTTCGGAGTTTTCTTTACTGAGTCAGAAAGTAAAGGTGAAATAGAATCAGAGTCTGATGAAGCAATTTATATAAGAATAGACAAAAAAAGAAAATTTCCTGCCACAGCCCTATTGCGTGTTCTGGGTTATAACACCAATGAAACGATATTAAAAGCATTTGAGAAAACTCCTAATTGCAAAGAAGTAATTGAAGCTTGTTTAGCGAAGGATGTCGCTAAAACATTAAGTGATTCATATATTGAAATATATAAACGTTTAAGAGATGGAGACATGGCTACACCTGAAAATGCTAAAGAGTTCATCAATTCTTTGTTTACTCCCGAAAGATATGATCTTTCTCCGGTTGGACGATATAGATTCAATAAACGTTTCGATAAGTCATTAGAGGAAAAAGAACTTGTACGCCGAACTATCTCTAAAGAAGATTTGATGACAGTAATTGCGAATATTATTGTCTTGAACAATACTCTGGGCGCCAAATCTGATGACATAGACCATTTGGGGCAAAGACGTGTTCGATTTGTTGGAGAAATGCTTCAGCAAAAAGTACGCACAGGCATGATGCAGATTAAAAGAAATATTCAAGACAGAATGTCTATTATTGACGTTGATACTGCTATGCCTATTCACATTATTAACCAGCGTCCACTTCAAGCCCGCATCAAGGAATTTTTTACTACCAATCAACTTTCACAATTTATGGCGCAAGAAAATGTACTTTGCGAAATGGAGCACTTGCGTACTCTTTCAGCCCTTGGTCCTGGTGGTCTGACTCGTGAACGTGCAGGTCTCGAGGTGCGAGATGTACATCCAAGTCACTATGGAAGAGTTTGTCCAATTCACACTCCGGAAGGCCCTAACATCGGACTTATTTTACATCTTTCTACTTATGCAAAAATTAATGATTTCGGAATTATTGAAACCCCGTATATAAAAGTAAAAAATGGAAAAATTACCAAGGAAATTCAATATTTAAATGCGCTTGAAGAAGAGAAGTACAATATTGCTCATGCAGGAATTCCTTATGATGAAAATGGGAAAATAACAGAAGAAAAAGTGGAAGCTAGAGTAAAAACTAATCCGGGTATGATTACTCGCAACCAAGTTGATTTTATTGATGTGGCAGCCAATCAGGGTTTTTCTGTAGCCACTTCTATGATTCCTTTCTTGGAACACAACGACGCCAATCGCGCCCTGATGGGATCTAATATGCAGAAACAAGCTGTTCCTTGCGTGCTTCCCGAAGTACCTTTGGTGGCAACGGGCGTTGAAGCTTTGGCTTCTCGTGACTCTGGCAGAATGGTTCTTGCCTCAGAGGATGGGGTTGTTTCTTATTTAGATGCAAAAAAAATAATAGTAAAAGGAAAGACAGAAAAAATATATTCTCTTGTTAATTTTTTGAGAAATAATAATTTTTCTGCATTTCATCAACGCCCGGCGGTAAATATCGGTCAAAAGGTGAAAAAAGGTGATGTATTAGCCGATACAACAAGCACCGTAGATGGACAAATCTCAATTGGTCAGAATGTTTTTATCGCTTTCTTGTCTTGGTCTGGATTAAACTATGAAGATGCTGTCATTATTTCCGAACGGCTGGTAAAGAAAAGTAAATTTACCAGCGTGTATGTTGAAGAATTTGTCTGCACGGTTCGTGATACCAAACTTGGACCTGAAATTACTACTCGGGACATACCTAATGTCGGAGAATTAAAACTTAAAGACTTGGATGAGGACGGCATTGTTCGTATTGGAGCCGAAGTCAGAGAAAATGATATTTTAATCGGTAAAATTACACCTAAAGGTGAGACTGAACTTACCCCGGAAGAACGATTATTACGTTCAATTTTTGCTGAAAAAGCGCGTGATGTTAAGGACACCTCCCTTCGTATGGAGCATGGAAAACGCGGACGTATTATCGGCATTAAAATTTTCTCCCGTGACTTGGGTCATACTCTTGAGGCAGGGATCATCAAGAAAATTGTTATTGAGGTTGCTCAAATTAGAAATATTTCAGTTGGAGATAAACTTTCTGGACGACATGGAAACAAGGGAGTTATTTCTAGAATCCTTCCGGAGGAAGATATGCCTTACACAGCAGAAGGCATACCAGTTGATATAATACTTTCACCCCTGGGTGTTCCTTCTCGTATGAATTTAGGACAAATTTTAGAAATGCATCTTGGCATGGCAGCTAATGCTCTAGGTTATCAAGCCGTTGTTCCTCCATTTCTAGGAGCAAAACGCGAAGAAATAAAAGAGGAGTTGAAAAAAGCCGGGCTTCCAGAAAATGGCAAATTAAAACTTTTTGATGGGCGTACCGGGGAAAGTTTTGATCAGGATGTGGCTGTCGGCTATATGTATATGTTGAAATTGCATCACATGGTGGAAGATAAAATTCATATGCGATCTATTGGACCTTATTCTCTTATTACTCAACAGCCTTTAGGGGGAAAAGCTCAAGGTGGAGGACAAAGATTTGGAGAAATGGAAGTTTGGGCCTTGGAAGGATATGGGGCAGCCTATACATTGCGAGAAATGCTTACCATCAAGTCCGATGATATTTTGGGTCGTTCTCAGACATTTGATTCTATTATAAAAAATGAAATCATTAAACCGCCAAATTCTCCTGCCTCATTTAATGTTTTGCTTAATTATCTACGAGGACTTGCGCTTGATGTTAACTTGAAAAAATATGAAAACTCTTAA
PROTEIN sequence
Length: 1039
MQTEKRPKKYFSRYKNPLIEFPNLIEAQTKSYKWLVEEGLKEVFKEFSPIIDYSGKKFELEFTSFSLSEPNCEENDAKINKLSYQGLLKTRVKLTNKILGTVKEQEIFMSEIPLMTPHGTFIINGVERVIVPQLARSFGVFFTESESKGEIESESDEAIYIRIDKKRKFPATALLRVLGYNTNETILKAFEKTPNCKEVIEACLAKDVAKTLSDSYIEIYKRLRDGDMATPENAKEFINSLFTPERYDLSPVGRYRFNKRFDKSLEEKELVRRTISKEDLMTVIANIIVLNNTLGAKSDDIDHLGQRRVRFVGEMLQQKVRTGMMQIKRNIQDRMSIIDVDTAMPIHIINQRPLQARIKEFFTTNQLSQFMAQENVLCEMEHLRTLSALGPGGLTRERAGLEVRDVHPSHYGRVCPIHTPEGPNIGLILHLSTYAKINDFGIIETPYIKVKNGKITKEIQYLNALEEEKYNIAHAGIPYDENGKITEEKVEARVKTNPGMITRNQVDFIDVAANQGFSVATSMIPFLEHNDANRALMGSNMQKQAVPCVLPEVPLVATGVEALASRDSGRMVLASEDGVVSYLDAKKIIVKGKTEKIYSLVNFLRNNNFSAFHQRPAVNIGQKVKKGDVLADTTSTVDGQISIGQNVFIAFLSWSGLNYEDAVIISERLVKKSKFTSVYVEEFVCTVRDTKLGPEITTRDIPNVGELKLKDLDEDGIVRIGAEVRENDILIGKITPKGETELTPEERLLRSIFAEKARDVKDTSLRMEHGKRGRIIGIKIFSRDLGHTLEAGIIKKIVIEVAQIRNISVGDKLSGRHGNKGVISRILPEEDMPYTAEGIPVDIILSPLGVPSRMNLGQILEMHLGMAANALGYQAVVPPFLGAKREEIKEELKKAGLPENGKLKLFDGRTGESFDQDVAVGYMYMLKLHHMVEDKIHMRSIGPYSLITQQPLGGKAQGGGQRFGEMEVWALEGYGAAYTLREMLTIKSDDILGRSQTFDSIIKNEIIKPPNSPASFNVLLNYLRGLALDVNLKKYENS*