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gwa2_scaffold_5185_42

Organism: GWA2_OP11_41_24

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 9 / 38
Location: comp(42266..43411)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_OP11_Curtissbacteria_41_11_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 381.0
  • Bit_score: 741
  • Evalue 7.00e-211
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 369.0
  • Bit_score: 431
  • Evalue 1.80e-118
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 431
  • Evalue 2.00e+00

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Taxonomy

R_OP11_Curtissbacteria_41_11 → Curtissbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1146
ATGAAAAAGAAAAATAATTCCGATACAAACAATCGAAAAAAGTCTGCAAAAGATAAGCAGCTAGGAAAGAAAATTGATATCAAGACGGAAATCCGCAAGCTCATTAAGCGCGGCCGGGAACAGGGTTTTGTCACCCAGGATGAGATTTTGGCGATTTTCCCCCAGCCGGAACTCTGTATAAACGAAGTCGATGAGCTATATCATAAATTGCTTGATGAAAAGGTCGATGTTTTCGACACAACCGAGATCGATACGGCCGAAGTTTCCAAATCGGTTTCAGAGCTGGAAAAGGAGCTCGAAGATTTGGCGGCTATGGGCGAAGGTTATCTTTCCGATCCGGTCAGAATGTATCTAAGGGAAATCGGCAGAGTTTCCCTTTTAACTTATGAGGAGGAAGTTGCTCTGGCCAAAAGAGTCGAGAAAAGTGACCGACGCGCCAGAGAACGACTAATTAACGCCAACCTGCGTTTGGTTGTTTCCATTGCCAAAAAATATGTTAATCGGGGTTTGACTCTTTTAGATCTGATTGAAGAGGGCAATATCGGTTTGATGCGGGCCGTAGTCAAATACGATTGGCGCCGGGGCTATAAGTTCTCGACTTATGCGACTTGGTGGATTAGACAGGCGATTACCCGGGCAATTGCCGATCAGGCCAGGACAATCCGCATCCCGGTTCACATGGTTGAAACAATCAATAAGTTCAACCGCATCTCCAGAAAGCTGATGCAGGAGTTAGGGCGGGAACCGACACCCGAGGAAGTAGCCTTTGAAATGGAAGTAGGTACTGACAAAATTCGGGAAATCATCAAGGTTTCCCAGGAACCGGCGTCGTTAGAGGCACCGGTCGGCGAAGAGGAAGATAGCCGGCTTGGCGATTTTATTCAGGATGTTTCAGCATCCCCAACTGATCAGGCAACGCAAGCGCTTCTTAAGGATCATATCCACGAAATGCTCTTGACTCTTTCGCCTCGCGAGGCCAAAGTTTTAGAGTATCGTTTTGGACTAGAGGATGGTAAACAAAGGACACTCGAGGAGGTCGGCCGCGAATTCGGGGTGACTCGGGAGCGAATTCGCCAAATTGAAGCCAAAGCCATTAGAAAACTACGGCACCCGACGCGGGCCAAAAAGTTGCGGGATTATTTATAA
PROTEIN sequence
Length: 382
MKKKNNSDTNNRKKSAKDKQLGKKIDIKTEIRKLIKRGREQGFVTQDEILAIFPQPELCINEVDELYHKLLDEKVDVFDTTEIDTAEVSKSVSELEKELEDLAAMGEGYLSDPVRMYLREIGRVSLLTYEEEVALAKRVEKSDRRARERLINANLRLVVSIAKKYVNRGLTLLDLIEEGNIGLMRAVVKYDWRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKFNRISRKLMQELGREPTPEEVAFEMEVGTDKIREIIKVSQEPASLEAPVGEEEDSRLGDFIQDVSASPTDQATQALLKDHIHEMLLTLSPREAKVLEYRFGLEDGKQRTLEEVGREFGVTRERIRQIEAKAIRKLRHPTRAKKLRDYL*