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gwf2_scaffold_1390_16

Organism: GWF2_TA06_54_11

near complete RP 53 / 55 MC: 1 BSCG 48 / 51 ASCG 13 / 38
Location: comp(16376..17236)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase primary sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFOXYC12_FULL_TA06_54_24_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 286.0
  • Bit_score: 556
  • Evalue 1.80e-155
rpoD; RNA polymerase primary sigma factor KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 284.0
  • Bit_score: 259
  • Evalue 1.60e-66
RNA polymerase primary sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 258
  • Evalue 2.00e+00

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Taxonomy

RIFOXYC12_FULL_TA06_54_24_curated → TA06 → Bacteria

Sequences

DNA sequence
Length: 861
ATGAGTTATCGGGAAATTGCCTATAATGACGATCCGTCGCTGGATATCTACCTCAAGGAGATCAGCCGGGTCCCCCTGCTGTCGCCGGACCAGGAGCTGGCCCTGGCCCAGCAGGCCAAGGCGGGCATCAAGGCCGCCATCGACCGGCTGACCGAGAGCAATCTGCGCTTCGTGGTGTCCACCGCCAAGGAATTCCAGGGCCGGGGGCTTTCCCTGGCCGACCTCATCAACGAAGGCAATGTGGGGCTGATGAAGGCGGTCCAGCGGTTCGAGCCGTCCCGGGGATATCGTTTCAACACCTATGCCGTGTGGTGGATCAGGCAGGCCATGCTGAAGGCCATCGCCGAACAGACCCGGACCATCCGGCTGCCCATGAACCGCATTGAGAAGCTGACCCGGCTGAACCGGGCCATCGAGGAGATAAAGAGCGACCCCGGCTACAACGGCGCCCCGCCCACCGTCAAGCAGATATCCAAAAAGGCCAGGATCCCGGTGGAGGAGATCCGCGATCTGCTGGGTTACAGCGCCAACCAGGTCTCCCTGGATGCCCCGTTGTCGGAGGACGGCGAGACCAGTCTTTCGGAGATAGTGGAGCATCCCCGCTTCAGATCACCCGAGGAAACGTTGAAGAGCAAGACCATGGACAGCGACATCAAGCAGGCCTTTTCGGTGCTGACCCCGCGGGAGGTCAGGGTGCTGAAGCTTTATTACGGACTGGACGATAACGACCATGGAACGCTGGACTCCATTGGGCAGAAGATGAACATCTCCCGGGAACGGGTGCGGCAATTGAGGGATCGGGCACTACGGAAGATCAAACTGGCCACCGAGGGCGGCCGGCTGAAGGCCTATCTGAGCTGA
PROTEIN sequence
Length: 287
MSYREIAYNDDPSLDIYLKEISRVPLLSPDQELALAQQAKAGIKAAIDRLTESNLRFVVSTAKEFQGRGLSLADLINEGNVGLMKAVQRFEPSRGYRFNTYAVWWIRQAMLKAIAEQTRTIRLPMNRIEKLTRLNRAIEEIKSDPGYNGAPPTVKQISKKARIPVEEIRDLLGYSANQVSLDAPLSEDGETSLSEIVEHPRFRSPEETLKSKTMDSDIKQAFSVLTPREVRVLKLYYGLDDNDHGTLDSIGQKMNISRERVRQLRDRALRKIKLATEGGRLKAYLS*