ggKbase home page

gwa2_scaffold_5465_15

Organism: GWA2_OD1_44_13b

partial RP 38 / 55 BSCG 39 / 51 ASCG 8 / 38 MC: 1
Location: comp(12567..13748)

Top 3 Functional Annotations

Value Algorithm Source
rpfA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_44_16_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 393.0
  • Bit_score: 766
  • Evalue 1.60e-218
rpfA; 30S ribosomal protein S1 KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 358.0
  • Bit_score: 247
  • Evalue 6.60e-63
RNA binding S1 domain protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 251
  • Evalue 4.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_Giovannonibacteria_44_16 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGCCAACAGCGACAATATCAACGGATAAAGACGTCAAAATCAACCAGATAATGGAAGATTTGCTGAAATCCCGCCCGAGGGGTTTTTTGAAGGCGGGTGACGTGGTTGACGGCGAGGTTATTAAAAAGCAGGGAGCAAGGCTTTATCTCAATTTAAAAGGCTTCGGCACGGGCATTGTTTACGGCAAAGAATATCAGAACGCGCGCGAAATAATCAAAACACTGAAAACGAGCGCTGTGGTTTCCGGAAAGATAGTGGCGCTGGAAAACGAAGACGGTTTTATTGAGCTTTCATTAAAAGAAGCTGGCTCAGAAATGATCTGGAAAGAAGCAACTTTGATAAAAGCAAATCAGGACATAATCGATCTTAAAGTTCTCGACTCAAACAAAGGCGGGCTGGTATTTGAATGGAAAAGCATCAAAGGATTTCTGCCTGCCTCGCAATTAAAAGCAACCCACTACCCGAGAGTCGAGGGCGGCGACAAGGATAAAATTTCCGAAGAATTAAAAAAACTGGTCGGAGAAACTCTGTCTGTAACTATTTTGGATTTTGAGCCGAAAGAAGAAAAATTGATATTTACCGAAAAGGGCGCATCCGGTTCGGAGGAAATCAAAAAAATAATCGAGAAATACAAAGTCGGGGACGTTGTTGAGGGAGATATTACCGGCGTGGTTGAATTCGGAATTTTCATAAAAATAGAAGAGGGGCTTGAGGGCCTCGCACATATTTCCGAGCTTGACTGGGGCCTGGTTGAAAGCCCGTCGGCACTTTTCAAAGTCGGCGACAAAATAAAAGCAAAAATAATTTCCGTGGAGAGCGACAAAATTTCGCTTTCGGTAAAAGCGCTAAAGCCCGACCCGTGGGAATTGAACAAAGAAAAATATAAAAAGGGAGATATTGTTGAAGGAAAAGTATTACGTCTCAATAAGTTCGGCGCACTGATTTTCCTTCAAGCGGGAATTTACGGGCTCGCCCACATCTCCGAATTCGGAACGGAAAAAAGAATGCGTGAATTGGTGGAGGCGGGGCAGACTTATATGTTCCAGATTGCCGTGTTTCACCCCGAAGACCGCAAACTCTCGCTCTCATTCCTCGGCAAAGACGGACAGGTCCCGGCCGACCTCAAGCCTCCCAAAAAAGAAGAGGCTAAAGAAGAGAAAAAAGAAGATGAATCAAAGTAA
PROTEIN sequence
Length: 394
MPTATISTDKDVKINQIMEDLLKSRPRGFLKAGDVVDGEVIKKQGARLYLNLKGFGTGIVYGKEYQNAREIIKTLKTSAVVSGKIVALENEDGFIELSLKEAGSEMIWKEATLIKANQDIIDLKVLDSNKGGLVFEWKSIKGFLPASQLKATHYPRVEGGDKDKISEELKKLVGETLSVTILDFEPKEEKLIFTEKGASGSEEIKKIIEKYKVGDVVEGDITGVVEFGIFIKIEEGLEGLAHISELDWGLVESPSALFKVGDKIKAKIISVESDKISLSVKALKPDPWELNKEKYKKGDIVEGKVLRLNKFGALIFLQAGIYGLAHISEFGTEKRMRELVEAGQTYMFQIAVFHPEDRKLSLSFLGKDGQVPADLKPPKKEEAKEEKKEDESK*