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gwa2_scaffold_18231_3

Organism: GWA2_Berkelbacteria_35_9

near complete RP 41 / 55 BSCG 43 / 51 ASCG 12 / 38
Location: comp(1334..1903)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKP88208.1}; TaxID=1618333 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 388
  • Evalue 4.40e-105
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 192.0
  • Bit_score: 127
  • Evalue 3.70e-27
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 127
  • Evalue 4.00e+00

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Taxonomy

GWA2_Berkelbacteria_35_9 → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGATACCAAAAAAAGACTTTATATCAGCCAGAAAATAATATCACAGGCAAAAAATGGCAATGATAAAGCTTTTGAGATTATTGTATCAACTTGCGAGCGGGCAATCTATAACTTTATTTTCCGGATGGTGCAAAGAAAAGAAGACGCCGAGGATTTAACCCAAGAAACTTTTTTAAAAATCTATAAAAATATCAAAAAATATAATCCGGAATATAAGTTTACCACCTGGATTTTTACTATTGCTCAAAGAACCGTTTATGATTTTCTACGCAAAAAACGCAAAACAAAAGAACTCTATATTATAGACGATAAAGACAATCCTTTTGAAACCCCAGACAAATCATCTGCGTATAACAACAGAGATTATATAATTGATATTAGCAGGTCGCTTCAAAAATTGGATTACAACTACAAAAGCGTGCTGTGGTTACATTACTGGGAAGGATTGTCGTATAAAGAGATAGGGGCAACTATGCGGTTGCCAATAAACACAGTTAAAACCTATTTGCATCGGGCAAAAGAAAAGTTAAAAACCCAACTTGGAAAAGAGTATTATGAAAAACATTAG
PROTEIN sequence
Length: 190
MDTKKRLYISQKIISQAKNGNDKAFEIIVSTCERAIYNFIFRMVQRKEDAEDLTQETFLKIYKNIKKYNPEYKFTTWIFTIAQRTVYDFLRKKRKTKELYIIDDKDNPFETPDKSSAYNNRDYIIDISRSLQKLDYNYKSVLWLHYWEGLSYKEIGATMRLPINTVKTYLHRAKEKLKTQLGKEYYEKH*