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ACD80_29_22

Organism: SR1_ACD80

near complete RP 45 / 55 MC: 10 BSCG 42 / 51 ASCG 0 / 38
Location: comp(22749..23474)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 220.0
  • Bit_score: 208
  • Evalue 2.70e-51
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=2 to=228 evalue=4.1e-41 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.10e-41
TruB_N (db=HMMPfam db_id=PF01509 from=21 to=186 evalue=8.1e-25 interpro_id=IPR002501 interpro_description=Pseudouridine synthase II, TruB, N-terminal GO=Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.10e-25

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Taxonomy

ACD80 → SR1 → Bacteria

Sequences

DNA sequence
Length: 726
ATGTTATTAGCCGTTGATAAACCAGGACGAATTACGAGCTTTGATGTTGTACGTATCTTCAAACGTCATTTTCCAAAACAGAAAATCTGACATAGTTGAACGCTCGATCCTATGGCTACCGGACTCATGATACTCGCATTGGACAAAGATACAAAAAAACTGACAGAACTTATCTGACTGGACAAATCCTATATCGCTACGATTGATTTTTCAAAAGTCACGGATACGCGGGATATGGAATTCTGGGAGAAAATTACGAATTACGAATTACAAATTACGAATTGAAAGGCTACCGGAGTTGAAATGGAAGGTGGAACTGCAGAGGCGCCATCTTTGGGAGAGATCAAAAAACAGCTTGATAAATTGATCCCTTCGTATGACCTCCCACTCCCCGCTTTCAGTGCAAAAAAAAGAGCAGGAAAAAGATCTTATGATGAAGCGAGAGCAGGGAATATCATTGAAGAAAATAAAGTCATGAAGGTGCATGGATATGAAATTTTGAACTATGCATTTCCGACGCTTCAACTCAGGCTGGATGTCGGTTCTGGAACGTATATCAGATCTATCTGATATCGGCTGGGTAAACAGCTCGGTATCGGAGGAACTCTAATCCAGCTCAGAAGGACGAGTATCGGGAAGTACGATATCGCTACGATCAAGAATTGGGAGAATCTGCATAATAGGTATAAAGAGAAGGAAGAAATCATCCCTTTTGCACAAATATAA
PROTEIN sequence
Length: 242
MLLAVDKPGRITSFDVVRIFKRHFPKQKIGHSGTLDPMATGLMILALDKDTKKLTELIGLDKSYIATIDFSKVTDTRDMEFWEKITNYELQITNGKATGVEMEGGTAEAPSLGEIKKQLDKLIPSYDLPLPAFSAKKRAGKRSYDEARAGNIIEENKVMKVHGYEILNYAFPTLQLRLDVGSGTYIRSIGYRLGKQLGIGGTLIQLRRTSIGKYDIATIKNWENLHNRYKEKEEIIPFAQI*