ggKbase home page

gwc1_scaffold_5555_6

Organism: GWC1_OD1-rel_45_9

near complete RP 39 / 55 BSCG 43 / 51 ASCG 11 / 38 MC: 2
Location: 2345..3160

Top 3 Functional Annotations

Value Algorithm Source
Type 4 fimbrial assembly protein PilB {ECO:0000313|EMBL:KKU16353.1}; TaxID=1618916 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_9.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 271.0
  • Bit_score: 518
  • Evalue 6.90e-144
type II secretion system protein E KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 242.0
  • Bit_score: 241
  • Evalue 2.50e-61
Type 4 fimbrial assembly protein PilB alias=gwe2_scaffold_403_25 id=2014254 tax=GWE2_OD1_ACD81_47_12 species=Caldisericum exile AZM16c01 genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica similarity UNIREF
DB: UNIREF90
  • Identity: 62.7
  • Coverage: null
  • Bit_score: 299
  • Evalue 1.10e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWC1_45_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGAGTATAGACAAATCAGCGATTGAAAAAGAAATCAATGGCCCGGTAGATAAAATCTCCATTATTAAACTGGTTGACCTTTTGATTGAGTACGCTTATCAGGCGCGGGCTTCGGACATTCACATTGACCCCGGAGAAGACAAGGTCAAAATCAGACTGAGGATTGACGGCGTGATGCAGACGGTTTTTGCGATTGACAAAAGCATTCAGGAGGAAATCATCAGCCGCATCAAAGTTTTGTCTGACTTGAGAATTGACGAGCACCAGGCTCCGCAAGACGGCCGGTTCAAAGTTTCTTTGACGGAAAAAGCCGCCAAGGTCCAGTTTGATGTTCGGGTTTCCATCATGCCGACTTATTACGGCGAGAACGCGGTTTTGCGGCTTTTGGTTGAGCAGGGCCGGTCTTTCGGATTTGAAGACATTGGCTTGTCGGAAAAAGATTATGAAAGAGTCAAGCGGGCAATCAAGCGGACATTCGGCATGATTCTGGTTACTGGCCCGACAGGTTCGGGAAAAACGACGACGCTTTATACGATTTTGAAAACTTTGAACAAACCGGGCGTTTCAATCATCACCATTGAAGACCCGATTGAATACTCGCTTGAGGGCACGAACCAAATTCAGGTTAACTCCAAAACCGAACTGACGTTTGCCAACGGCTTGCGTTCAATCCTGCGCCAGGATCCGAATATCATCATGGTCGGCGAGATCAGGGATCAGGAAANNNNNNNNNNNNNNNNNNNACCGGGCACTTGCTGCTTTCGACTTTGCACACCAACGATTCGGCAACGGCTCTGCCGCGTCTTTTGGACATGA
PROTEIN sequence
Length: 272
MSIDKSAIEKEINGPVDKISIIKLVDLLIEYAYQARASDIHIDPGEDKVKIRLRIDGVMQTVFAIDKSIQEEIISRIKVLSDLRIDEHQAPQDGRFKVSLTEKAAKVQFDVRVSIMPTYYGENAVLRLLVEQGRSFGFEDIGLSEKDYERVKRAIKRTFGMILVTGPTGSGKTTTLYTILKTLNKPGVSIITIEDPIEYSLEGTNQIQVNSKTELTFANGLRSILRQDPNIIMVGEIRDQEXXXXXXXPGTCCFRLCTPTIRQRLCRVFWT*