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cg1_0.2_scaffold_24_c

Search features with annotation key words

Displaying items 61-90 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_24_c_60
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

57300..58526
DNA (1227bp) protein (409aa)
Stage V sporulation protein E n=1 Tax=Bacillus coagulans 36D1 RepID=C1P6Z7_BACCO id=124073 bin=ACD78 species=Bacillus coagulans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cell division protein FtsW; K03588 cell division protein FtsW Tax=CG_PER_01
mrdB; rod shape-determining protein RodA
cg1_0.2_scaffold_24_c_61
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

58564..59610
DNA (1047bp) protein (349aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undec
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
cg1_0.2_scaffold_24_c_62
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

59646..60332
DNA (687bp) protein (229aa)
peptidylprolyl isomerase n=1 Tax=Bacillus oceanisediminis RepID=UPI0002FC251C rbh
Peptidyl-prolyl cis-trans isomerase A Tax=CG_PER_01
peptidyl-prolyl cis-trans isomerase A
cg1_0.2_scaffold_24_c_63
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

60381..61850
DNA (1470bp) protein (490aa)
Glutamyl/glutaminyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=CG_PER_01
glutamyl/glutaminyl-tRNA synthetase
cg1_0.2_scaffold_24_c_64
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(61680..62036)
DNA (357bp) protein (119aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_65
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

62069..62533
DNA (465bp) protein (155aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_66
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

62587..63450
DNA (864bp) protein (288aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=CG_PER_01
gem:GM21_1080 UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] id=89089 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i rbh
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
cg1_0.2_scaffold_24_c_67
unknown

Not on your lists

63508..63696
DNA (189bp) protein (63aa)

This feature has no annotations

cg1_0.2_scaffold_24_c_68
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(63704..64558)
DNA (855bp) protein (285aa)
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=CG_PER_01
single-strand binding protein; K03111 single-strand DNA-binding protein id=95820 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
single-strand binding protein
cg1_0.2_scaffold_24_c_69
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

64752..67841
DNA (3090bp) protein (1030aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_70
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

67838..68653
DNA (816bp) protein (272aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_71
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

68654..69448
DNA (795bp) protein (265aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_72
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

69445..71940
DNA (2496bp) protein (832aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_73
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

71937..73496
DNA (1560bp) protein (520aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_74
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

73559..77341
DNA (3783bp) protein (1261aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=CG_PER_01
DNA polymerase III subunit alpha (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CIN6_9BACT rbh
cg1_0.2_scaffold_24_c_75
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

77341..77958
DNA (618bp) protein (206aa)
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_PER_01
SUA5/YciO/YrdC/YwlC family protein; K07566 putative translation factor id=73135 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER rbh
translation factor Sua5
cg1_0.2_scaffold_24_c_76
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

78017..78463
DNA (447bp) protein (149aa)
ATP-cone domain-containing protein; K07738 transcriptional repressor NrdR Tax=CG_PER_01
hypothetical protein; K07738 transcriptional repressor NrdR id=5802971 bin=PER_GWA2_38_35 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) rbh
ATP-cone domain-containing protein
cg1_0.2_scaffold_24_c_77
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

78631..78993
DNA (363bp) protein (121aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6KX83_BACV8
hypothetical protein Tax=CG_PER_01
hypothetical protein
cg1_0.2_scaffold_24_c_78
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists


79047..80813
DNA (1767bp) protein (589aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_PER_01
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00035F4478 rbh
cg1_0.2_scaffold_24_c_79
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

80871..81860
DNA (990bp) protein (330aa)
Trichohyalin, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS-A RepID=N9TFT5_ENTHI
42.t00003; hypothetical protein Tax=CG_PER_01
hypothetical protein
cg1_0.2_scaffold_24_c_trna_1
unknown

Not on your lists

81891..81974
DNA (84bp)
transferRNA
cg1_0.2_scaffold_24_c_80
unknown

Not on your lists

82251..82352
DNA (102bp) protein (34aa)

This feature has no annotations

cg1_0.2_scaffold_24_c_81
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(82366..84108)
DNA (1743bp) protein (581aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_82
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(84113..84463)
DNA (351bp) protein (117aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_83
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(84537..87716)
DNA (3180bp) protein (1060aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=CG_PER_01
Transcription-repair-coupling factor n=1 Tax=uncultured bacterium RepID=K2DG76_9BACT rbh
transcription-repair coupling factor
cg1_0.2_scaffold_24_c_84
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(87863..89044)
DNA (1182bp) protein (394aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=CG_PER_01
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=5091124 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
DNA polymerase III subunit beta (EC:2.7.7.7)
cg1_0.2_scaffold_24_c_85
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(89417..90718)
DNA (1302bp) protein (434aa)
glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU (EC:2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-
glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU (EC:2.7.7.23)
cg1_0.2_scaffold_24_c_86
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(90766..91602)
DNA (837bp) protein (279aa)
metallo-beta-lactamase family protein Tax=CG_PER_01
metallo-beta-lactamase
cg1_0.2_scaffold_24_c_87
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(91642..93033)
DNA (1392bp) protein (464aa)
Tax=CG_PER_01
cg1_0.2_scaffold_24_c_88
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(93075..94568)
DNA (1494bp) protein (498aa)
Heteropolysaccharide repeat-containing protein n=1 Tax=uncultured bacterium RepID=K2D4A9_9BACT rbh
Membrane protein involved in the export of O-antigen and teichoic acid
Heteropolysaccharide repeat-containing protein Tax=CG_PER_01
Displaying items 61-90 of 140 in total

View Taxonomy