ggKbase home page

cg2_3.0_scaffold_9087_c_3

Organism: CG2_30_FULL_Parcubacteria_OD1_44_11_curated

partial RP 35 / 55 BSCG 36 / 51 ASCG 8 / 38 MC: 1
Location: 4403..8071

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) Tax=CG_CPR18-01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2394
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5803388 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 999.99
  • Bit_score: 1536
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 999.99
  • Bit_score: 1013
  • Evalue 3.60e-293

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_CPR18-01 → CG_CPR18 → Bacteria

Sequences

DNA sequence
Length: 3669
ATGAATCCACAAGCAAAAAAGAAATTCACGCCAACCAAGTTCTCTGGAATTAGTCTTAAGCTGGCCTCCCCTGAAAATATTCTTGAATGGTCTCATGGTGAGGTAACCAAGCCAGAAACTATCAATTACCGAACTCAGCGACCAGAAAAGCACGGCCTCTTTGACGAGCGCATTTTTGGACCAGTTGAAGATTACGAGTGTTCGTGTAAGAAGTATCGAGGCATACGCTACAAGGGTATTGTTTGTGAGAAGTGTGGGGTAGAAATCACTCGCGCTATCGTGCGCCGTGAACGTATGGGTCATATTGATCTCTGTGTACCGGTGTCACATATTTGGTTTCTTCGAGGCGTGCCTTCACGAATTGCTCTTCTTCTTGGCATCACTGCCGCGTCAGTCGAAAAAGTAATTTACTTTGCTGGCTACATTGTGACTAAGGTATCGGAGGAAGATCGCATGCGTTTGCTTCGCGATCTTGATGTTGAATACAAGACAAAAGTTAAAGAACTAAAGAACGAAGAGGCCAAAGAGGCAATGAAGATTCGTATGACCGAGATGAAGAAAGAAATCGAATCGCTCGCGCCTGGTCTCGTCCTTGATGAAACTCAGTTTCACCGCTTCTCGGTGAAGTATTCAACCCTGTTTGAAGCGCACATTGGTGCGGAAGCAATCTTTCAGCTCTTTAAAAATATCAATCTTGAGGTGCTTCTTGGTGAACTTGAGACCAAACGTGAAAAAGCTGGAGCAGCTGAACGGATTAAGCTCGACAAGCGTCTTAATCTTACTCGCGGTATGATTTATGCTGGGGTTCGTCCAGAGTGGATGTTCCTCACGCGTATTCCAGTCATTCCGCCAGCCATTCGTCCAATGGTAGCGCTTGAAGGGGGACGTCACGCTTCGTCTGATTTAAATGACCTCTACCGTCGTGTGATCAATCGAAACAATCGTTTGAAGAAGTTGATTGACATCATGGCGCCAGAAGTAATTCTTCGCAACGAAAAGCGTATCTTACAGGAAGCGGTTGATGCTTTGATTGACAATTCCATCCGCCACAGCAACACTGCTTACTCAGCCATGAGTCAAGCACAACGCCGACCGCTTAAGTCACTCTCGGATTATCTCAAGAGTAAACAAGGTTACTTCCGTCAGAACCTCCTTGGCAAGCGCGTTGATTACTCTGGTCGTTCAGTAATTGTTATTGGTCCGGAACTCGAGCTCGACCAATGTGGTCTCCCGAAACATATGGCCCTCGAACTTTTTCGTCCATTTGTTATTTCGCAACTCCTTAAACAGGAATTAGCGTACAACATTCGTGGTGCTGGTCGTTTGATTGAAGACGGTGTGCCAGAAGTGTGGGCTATTCTTGAAGATGTGATTGAACACAAACATGTACTCCTCAACCGTGCTCCAACCCTGCATCGACAAGGTATCCAGGCGTTTCGTCCAGTTTTGATTGAAGGTAACGCAATCCAAGTACACCCTCTCGTCTGTAAAGCGTTTAACGCTGACTTCGACGGTGACCAAATGGCTGTGCACGTACCACTCGGCGAAGAGGCACAGATGGAGGCTCGTGAGTTTATTTCAGCCAGCAAAAATATTTTGAAACCAGGTTCGGGTGAACCGGTAGTGTCTGAGTCATTAATGGATATGGCACTGGGTGCTTATTGGATGACAAAAATTATAGAAGGAGCTAAAGGTGAGGGTAAGTATTTTGCCTCACCAAATGATGCCATTAATGCACACGATTTCGGTATTGTTGATCTCCGCGCGAAAATAAAAGTGCTGGCCACTGACACGGAAAAGTATAAGCAGTTTGGGGGTTTGATTTTTGAATCAACAGTTGGCCGTCTGCTCTTTAACTCAGTACTACCAAGTGATCATCTCTTTATTAATGACGTGGTTTCGCAGCGTGAACTCTTCGCGATTATTATTGATCTAATTGAAGATCAAGGTCTTGATGTCGTCCCAGGAGTGGTTAACAAAATCAAGAAGTTTGGCTTTAAGTATGCCACAGTTTCAGGTACAACCTGGGGGATTGACGAAGTGGTGGTACCAAAAGAGAAGGGTGAGCTTATTGCCGCAGCATACGCTGAGCAACAAACGTTTATGGACTTTTACGAAGCGGGCTTGATTTCAAAGGAAGAGCGTCGGCGCATGATAATTGAAGTCTGGCACCGATCGAAGGCAAAGCTTGAAGAGCTCATCCCGCTGGCGATGGATCAAAATGGTTCAGCCTTTACCTTATGGAAATCAGGGGCGCGTGGTTCAATGCGACAGATTGCACAGATGGCTGGTATGAAAGGACTTATTGTAAACACGCGAGGTGAAACACTTGAGTTTCCAGTGATTGCCTCGATGAAGGAAGGTATGAGTCCGATTGAGTACTTTACAACCACTCACGGTTCTCGTAAGGGACTTGCCGATACCGCCCTTCAGACAGCTAAAGCTGGGTATTTGACTCGCCGTCTCTTTGTGGTAGCGCAAGATGCTATTGTTACACAAGAGGAATGTGGTACAAAGGATGGTGTTACTATTGGTCGCGTGACGGCCTCTGGTATTGAGATTGCCTTCTCGAAAGCTATTCGTGGCCGGATACTTGCCGCGGATGCGGTTGATAGTAAAGGTGATCTTCTCTTTAAGAAAGGTCACTTGATTAGTCGCCGCGATGCGGTTTTTGTTGAGGAATCAACCTGTGAGACAGTGGTAGTACGTTCGCCAATGACATGTGTGACCCTTCACGGCGTTTGTCAGCACTGCTATGGTGTTGATCTTACTACAAACAAACTCGTTGATATTGGTGAAGCTGTAGGGACCGTTGCTGCCCAGGCAATTGGTGAACCAGGAACGCAGCTGACAATGAACACCAAACATGCTGGTGGTACTTCAAGTGCTGGTGGAGACGTAACCCAAGGTTTGCCTCGGGTAGAAGAAGTATTTGAAAAACGGCAACCGAAGGTTCCGGCGGTGGTTTCAAAAGCTGAAGGTATTGTGACTGACATTCGGATTGAAGGAAAGACAAAGACTATTGTGGTAGCTGTCAATAAAGGAGCTGCAAATGCTCCCAAGAAAGGTGATACCTATGAGTACGAAGTCCCTTACCGTCGAGTGGTAAAAGTGGTAAAAAACGAAACAGTTACAGCTGGTCAGCTTCTTACCGACGGCTCAGCTCACTTGCCTGAACTGTTTAAGTTTGGTGGTAAAGAGATCACTCAAGAATATATAATTTCTGAAATTAACAAGATTTATGAGCTTCAAGGGGTGACCATTTCACGTAAACACATTGAACTTATTGTGAAACAAATGATGAGTCGCGTGAAGATTACTGCTTCTGGCGATAGTCCATTTACGATTGGTAATGTGGTTGAAGAATGGGTTTTTGTGGAGACGAATAATCAGCTTAAAGAAGCTGGAAAAGACGTTGCAAAAGCCGAACACATCATTATGGGTATTACAGAAAGTTCACTCTCTCGAAAGTCATTTCTCGCTGCCGCTTCATTCCAGAATACCACCCGCGTCTTAATTAACGCTGCAGTTCATGGTTCGCACGACAACTTGACTGGACTGATGGAGAACGTCATCGTTGGTCAACTTATTCCCGCCGGAACTGGTTTCAAAGGTTCTAAAAAGGCAGCGATGGTAGCGGCGGTAGTGGCAGCTCAAACTGACTACTAA
PROTEIN sequence
Length: 1223
MNPQAKKKFTPTKFSGISLKLASPENILEWSHGEVTKPETINYRTQRPEKHGLFDERIFGPVEDYECSCKKYRGIRYKGIVCEKCGVEITRAIVRRERMGHIDLCVPVSHIWFLRGVPSRIALLLGITAASVEKVIYFAGYIVTKVSEEDRMRLLRDLDVEYKTKVKELKNEEAKEAMKIRMTEMKKEIESLAPGLVLDETQFHRFSVKYSTLFEAHIGAEAIFQLFKNINLEVLLGELETKREKAGAAERIKLDKRLNLTRGMIYAGVRPEWMFLTRIPVIPPAIRPMVALEGGRHASSDLNDLYRRVINRNNRLKKLIDIMAPEVILRNEKRILQEAVDALIDNSIRHSNTAYSAMSQAQRRPLKSLSDYLKSKQGYFRQNLLGKRVDYSGRSVIVIGPELELDQCGLPKHMALELFRPFVISQLLKQELAYNIRGAGRLIEDGVPEVWAILEDVIEHKHVLLNRAPTLHRQGIQAFRPVLIEGNAIQVHPLVCKAFNADFDGDQMAVHVPLGEEAQMEAREFISASKNILKPGSGEPVVSESLMDMALGAYWMTKIIEGAKGEGKYFASPNDAINAHDFGIVDLRAKIKVLATDTEKYKQFGGLIFESTVGRLLFNSVLPSDHLFINDVVSQRELFAIIIDLIEDQGLDVVPGVVNKIKKFGFKYATVSGTTWGIDEVVVPKEKGELIAAAYAEQQTFMDFYEAGLISKEERRRMIIEVWHRSKAKLEELIPLAMDQNGSAFTLWKSGARGSMRQIAQMAGMKGLIVNTRGETLEFPVIASMKEGMSPIEYFTTTHGSRKGLADTALQTAKAGYLTRRLFVVAQDAIVTQEECGTKDGVTIGRVTASGIEIAFSKAIRGRILAADAVDSKGDLLFKKGHLISRRDAVFVEESTCETVVVRSPMTCVTLHGVCQHCYGVDLTTNKLVDIGEAVGTVAAQAIGEPGTQLTMNTKHAGGTSSAGGDVTQGLPRVEEVFEKRQPKVPAVVSKAEGIVTDIRIEGKTKTIVVAVNKGAANAPKKGDTYEYEVPYRRVVKVVKNETVTAGQLLTDGSAHLPELFKFGGKEITQEYIISEINKIYELQGVTISRKHIELIVKQMMSRVKITASGDSPFTIGNVVEEWVFVETNNQLKEAGKDVAKAEHIIMGITESSLSRKSFLAAASFQNTTRVLINAAVHGSHDNLTGLMENVIVGQLIPAGTGFKGSKKAAMVAAVVAAQTDY*