ggKbase home page

CG_4_10_14_0.2_scaffold_9702_c_3

Organism: CG_4_10_14_0_2_um_filter_Roizmanbacteria_OP11_36_9_curated

near complete RP 48 / 55 MC: 4 BSCG 45 / 51 ASCG 9 / 38
Location: comp(1720..2424)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 223.0
  • Bit_score: 137
  • Evalue 9.10e-30
rplY; 50S ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 232.0
  • Bit_score: 124
  • Evalue 3.90e-26
Tax=RIFOXYC1_FULL_RIF_OD1_03_37_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 234.0
  • Bit_score: 233
  • Evalue 2.20e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC1_FULL_RIF_OD1_03_37_11_curated → RIF-OD1-3 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGTCAGAATTTTTATTAGAAGCTAAGCAGCGTCAAGTAGGTCAACACAGTCAATTGACTAAAATTCGAGAAAATAGCCAGGTGCCTGGCGTGGTTTATGGTTTTCATAAAGATCCTCAACTAATCACGGTTGATTATAATGTTTTGTTAAAAATTTTAACAGAAGCAGGCACTAGTAATATTATTACTTTAAAGTTAGCTGGTCAGGAGATCAAAGTGATGGTTCGTGAATATCAGCAGGATCCGGTGACTGATAAAATTAAACATATTGATTTTTATGCTTTAACAGATAAGCGGATGATTACAACTACAGTGCCTTTGAATTTTATTGGCACTTCTAAAGCAGTTAAAGAACAAGGCGGAAAATTAACCATTAAACAAGATAAGGTCAAAGTAAAGTGCTTGCCAGCTAATTTGCCGGCTACAATTGAAGTAGATTTGAATTTATTGGCGGAAATAGGTCAAACCATATTAGTGAGTGGGTTAGAGGTGAGCGATAAAGTGACAATTCTTAATAATCCTAATAATCCAGTGATCAGCGTCGCTTTACCTAAGAAAATTCAGTTGACAACTGAAGAACAGACAGAAGCCAAAGATGCAGCAACAGAAGCTGTCGAGAGCGAAGCAGCTGTAGATGATCAGACCGCCCAAGAAAAAGAAGGTGAAGCAAAAAATACTGACCAAGCTCAAACAGGAGAAAAATAA
PROTEIN sequence
Length: 235
MSEFLLEAKQRQVGQHSQLTKIRENSQVPGVVYGFHKDPQLITVDYNVLLKILTEAGTSNIITLKLAGQEIKVMVREYQQDPVTDKIKHIDFYALTDKRMITTTVPLNFIGTSKAVKEQGGKLTIKQDKVKVKCLPANLPATIEVDLNLLAEIGQTILVSGLEVSDKVTILNNPNNPVISVALPKKIQLTTEEQTEAKDAATEAVESEAAVDDQTAQEKEGEAKNTDQAQTGEK*