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rifcsplowo2_01_scaffold_4943_3

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_43_24

near complete RP 35 / 55 MC: 4 BSCG 18 / 51 MC: 1 ASCG 31 / 38 MC: 2
Location: 2255..2761

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=AR6 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 339
  • Evalue 2.10e-90
RNA polymerase, sigma-24 subunit, RpoE similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 167.0
  • Bit_score: 75
  • Evalue 1.90e-11
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24441424 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 25.0
  • Coverage: 176.0
  • Bit_score: 73
  • Evalue 2.60e-10

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Taxonomy

AR6 → Pacearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 507
ATGCACCAATCTCTTACGAGTAATGAGGTAGAAAAGCTTGATAAGCTTTTGAGAAAACATGAAAAAAAGCTTATACATCGCATAAATAATTTAGTTGGAAATTTCGCCGATGCCGATGATATTCTCTCTATAGCTTTCATGAAGGCATTTAATGGGTATCATAACGTTAGGGAGAAGGAGGACATATCCTCTTGGCTGTACAATGTTTGTAACAGTGCTGTTTCAGACTTTTTCAGGTTGAAGAAGAATGATGCTTCCCGAATTACAGAATCGGTTGCAGATCCAGCCTGGAATATAGAAGAAAGAGTGGTATTTGAGAGTTCCATGGATGAGCTTATTGAAAGACTTCCACAGAATTATAGAATGCCACTGCTCCTTGACCAATTTGGGGATAGCTGCGCCGAAGGCGCAGCAGAGTTGAATATCTCTATTTCAACCTATAAGAACAGGCTTTATCGGGGAAGAACGGAACTGAGAAAGCAGATGGAATCGCCTTATCCAACATAA
PROTEIN sequence
Length: 169
MHQSLTSNEVEKLDKLLRKHEKKLIHRINNLVGNFADADDILSIAFMKAFNGYHNVREKEDISSWLYNVCNSAVSDFFRLKKNDASRITESVADPAWNIEERVVFESSMDELIERLPQNYRMPLLLDQFGDSCAEGAAELNISISTYKNRLYRGRTELRKQMESPYPT*