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rifcsphigho2_02_scaffold_2648_25

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_28_36

near complete RP 37 / 55 MC: 3 BSCG 12 / 51 ASCG 36 / 38
Location: comp(20383..21051)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1P {ECO:0000313|EMBL:KHO52827.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 223.0
  • Bit_score: 218
  • Evalue 9.30e-54
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 219.0
  • Bit_score: 209
  • Evalue 4.00e-51
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 219.0
  • Bit_score: 196
  • Evalue 5.80e-48

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Taxonomy

archaeon GW2011_AR17 → Archaea

Sequences

DNA sequence
Length: 669
ATGGATAAATCACAAATAAACCAAGCATTAAAGGAATTAAGGGAAAAGAGTCCAAAAAGAAATTTTTCTCAAAGTATTGATATAATATTTCTTTTAAAAGATATTGATATGAAAAAAAATGAAAATAGAATTGACACATACATAGTACTTCCAAATAGCATTGGTAGAAAAGTAAAAATATGTGGATTAGTTGATCAGCAACTTGTAAATATATCTAAAAAAACATTTGATCACACAATTGTTTTGGAAGAATTTAAAAATATAAGCAAAGAAAAAAAGATTATTAGAAAATTAGCAAAAGATTATGATTTTTTTGTAGCACAAGCAAATATAATGAGTCAAGTAGCAACAACCTTTGGTAAAATCCTCGGACCAAAGAAAAAAATGCCAAATCCAAAAGCAGGATGTGTTGTTCCAGGGACAATACCAAGTTTAGATCCAATTGTTCAAAAACTGAATAATACAATTAAATTATATAGTGGATCTGAAAAGGCAGTAAAGATTTGTGTTGGTAAAGAAGCAATGAAAGATGAAGAATTAACAGATAATATCATAGCTGTATATAATTTTTTACTTACAAAATTGCCACAAGAGAAGCAAAATATTAAAGATATAATATTAAAATTTACAATGGGTCCAATCTATAAGATAGGTAAAGGAATGAAATGA
PROTEIN sequence
Length: 223
MDKSQINQALKELREKSPKRNFSQSIDIIFLLKDIDMKKNENRIDTYIVLPNSIGRKVKICGLVDQQLVNISKKTFDHTIVLEEFKNISKEKKIIRKLAKDYDFFVAQANIMSQVATTFGKILGPKKKMPNPKAGCVVPGTIPSLDPIVQKLNNTIKLYSGSEKAVKICVGKEAMKDEELTDNIIAVYNFLLTKLPQEKQNIKDIILKFTMGPIYKIGKGMK*