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gwf2_scaffold_4147_21

Organism: GWF2_OD1_45_11

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(19420..20016)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKT92850.1}; TaxID=1618973 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 388
  • Evalue 6.00e-105
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 182.0
  • Bit_score: 179
  • Evalue 1.10e-42
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 182
  • Evalue 9.00e+00

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Taxonomy

GWF2_OD1_45_11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGAGCAGACCAAATGATGTCTTAGGCAAAAGCGATGCCGAGCTTGTCCGTCTGTCCTTACAAAATCAGGACAATTTTTTATTTATAGTCCAGCGTTACGAAACTAAGCTTTTGCGGTATATTAGGCGGATTTCCGGCGTCTCGGCCGAAGACGCCGAGGATGTGCTACAGGAAGTTTTTATCAAGGTTTACTTGAAACTCAACGATTTTGATCCGGATCTTAAATTTTCATCCTGGATTTATCGCATTACGCATAATCAGGTCATCAGCCATTACCGCCGGCTTAAGGCTCGGCCTGTCGGCTTGGCTTTGGGTGAAAACAGCCAGCTGATAGACAGCCTGATTTCCTCTTTGAATCTTGAGGCGGATGTTGAGCTTGCACTCTTACGGGCGGATATTTATAAAGTTTTGAACCGGCTGGATGAGAAATATCGAGAGGTCATTGTTTTAAAATACTTTGAAGATAAGAATTACCGGGAAATTTCCGATATTTTAAAAAAACCGATGGGCACGGTGGGCACTTTGCTTAATAAAGCCAAGGATAAATTCAGAGCGGAGTTTGAGCGGCACAAAGATATTCATGTCCAATTTTTGTAA
PROTEIN sequence
Length: 199
MSRPNDVLGKSDAELVRLSLQNQDNFLFIVQRYETKLLRYIRRISGVSAEDAEDVLQEVFIKVYLKLNDFDPDLKFSSWIYRITHNQVISHYRRLKARPVGLALGENSQLIDSLISSLNLEADVELALLRADIYKVLNRLDEKYREVIVLKYFEDKNYREISDILKKPMGTVGTLLNKAKDKFRAEFERHKDIHVQFL*