ggKbase home page

gwc2_scaffold_2488

Alias: GWC2_OD1_44_17_11

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc2_scaffold_2488_1
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

1..486
DNA (486bp) protein (162aa)
Putative lipoprotein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
gwc2_scaffold_2488_2

Not on your lists

462..8372
DNA (7911bp) protein (2637aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT47277.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
gwc2_scaffold_2488_3
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

8384..8797
DNA (414bp) protein (138aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
gwc2_scaffold_2488_4

Not on your lists

8833..12507
DNA (3675bp) protein (1225aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT47279.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
hypothetical protein
Uncharacterized protein
gwc2_scaffold_2488_5
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

12551..13825
DNA (1275bp) protein (425aa)
seg 116..129 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
gwc2_scaffold_2488_6

Not on your lists

13827..14150
DNA (324bp) protein (108aa)
TIGR02436 family protein {ECO:0000313|EMBL:KKT47281.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
hypothetical protein
TIGR02436 family protein
gwc2_scaffold_2488_7
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

14229..15377
DNA (1149bp) protein (383aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase
gwc2_scaffold_2488_8

Not on your lists

15418..16374
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT47283.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
gwc2_scaffold_2488_9

Not on your lists

16382..16822
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT47284.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
gwc2_scaffold_2488_10
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

16842..17498
DNA (657bp) protein (219aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
hypothetical protein
Putative uncharacterized protein
gwc2_scaffold_2488_11
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

17519..19414
DNA (1896bp) protein (632aa)
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
Type IV secretory pathway VirB4 components-like protein
Type IV secretory pathway VirB4 components-like protein
gwc2_scaffold_2488_12
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

19439..20065
DNA (627bp) protein (209aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
gwc2_scaffold_2488_13

Not on your lists

20046..21197
DNA (1152bp) protein (384aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT47288.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
gwc2_scaffold_2488_14
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

21263..21778
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
hypothetical protein
Putative uncharacterized protein
gwc2_scaffold_2488_15

Not on your lists

21875..24481
DNA (2607bp) protein (869aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT47290.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
gwc2_scaffold_2488_16

Not on your lists

24568..24843
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT47291.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
hypothetical protein
Putative uncharacterized protein
gwc2_scaffold_2488_17

Not on your lists

24847..25125
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT48560.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
hypothetical protein
Putative uncharacterized protein
gwc2_scaffold_2488_18
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(25128..26531)
DNA (1404bp) protein (468aa)
peptidase M23 family protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
lipoprotein
Peptidase M23 family protein
gwc2_scaffold_2488_19

Not on your lists


26534..28138
DNA (1605bp) protein (535aa)
Leucine-tRNA ligase {ECO:0000313|EMBL:KKT47294.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
leucyl-tRNA synthase
Leucine--tRNA ligase
gwc2_scaffold_2488_20
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

28116..28991
DNA (876bp) protein (292aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Suspect SCG annotation. See neighboring gene [gwc2_scaffold_2488_19].
Leucine--tRNA ligase
gwc2_scaffold_2488_21

Not on your lists

28988..29587
DNA (600bp) protein (200aa)
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:KKT47296.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
rimN; tRNA threonylcarbamoyladenosine biosynthesis protein RimN
Sua5/YciO/YrdC/YwlC family protein
gwc2_scaffold_2488_22

Not on your lists

30192..32606
DNA (2415bp) protein (805aa)
UvrABC system protein A {ECO:0000313|EMBL:KKT47297.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
uvrA; excinuclease ABC subunit A
UvrABC system protein A
gwc2_scaffold_2488_23
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

32603..33241
DNA (639bp) protein (213aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
hypothetical protein
gwc2_scaffold_2488_24

Not on your lists

33238..34593
DNA (1356bp) protein (452aa)
O-antigen ligase-related protein {ECO:0000313|EMBL:KKT47299.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
O-antigen ligase-related protein
gwc2_scaffold_2488_25

Not on your lists


comp(34604..34948)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 {ECO:0000313|EMBL:KKT47300.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
rplT; 50S ribosomal protein L20
50S ribosomal protein L20
gwc2_scaffold_2488_26
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(34976..35152)
DNA (177bp) protein (59aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
gwc2_scaffold_2488_27
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(35157..35693)
DNA (537bp) protein (179aa)
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
translation initiation factor IF-3
Translation initiation factor IF-3
gwc2_scaffold_2488_28
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

36202..37668
DNA (1467bp) protein (489aa)
(p)ppGpp synthetase I SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA
gwc2_scaffold_2488_29
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(37675..40956)
DNA (3282bp) protein (1094aa)
nrdJ; vitamin B12-dependent ribonucleotide reductase NrdJ (EC:1.17.4.1) Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
ribonucleoside-diphosphate reductase alpha chain (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
gwc2_scaffold_2488_30

Not on your lists

comp(40981..41430)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR {ECO:0000313|EMBL:KKT49219.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
transcriptional regulator NrdR
Transcriptional repressor NrdR
Displaying items 1-30 of 55 in total

View Taxonomy