ggKbase home page

gwa2_scaffold_4987_18

Organism: GWA2_OD1_47_9

near complete RP 43 / 55 MC: 5 BSCG 47 / 51 MC: 7 ASCG 10 / 38 MC: 1
Location: comp(15907..17661)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_47_27_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 584.0
  • Bit_score: 1123
  • Evalue 0.0
secretion system protein E KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 605.0
  • Bit_score: 496
  • Evalue 9.30e-138
Type II secretion system protein E (GspE) similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 459
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_07_47_27 → RIF-OD1-7 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1755
ATGCGCGTTGAATCTCAACAGCTGAAGGCTTTTCTCCTAGAGACGCACTTAATTACCGAAAAAAAATTTGAGAAGGCCATTAAAGAAGCCGATGAGTCCGGCCGGAAAATCGGCGATATTTTAGTGGCGGAAAACGTTGTTTCTTATGAACAGCTTCTGCAGGTGGAAGCGTATATTTTAGGAATTCCGTTCGTGAATTTAGAAAAAGAAAAGGTGGAGCCGGATGTGCTTAAGATTATTCCAGAGCCCATTGCCAGGACGCATAATATAGTCGCATTCAGGAGAAAAGGCAATAATCTCGAGGTGGCGATGCTTGACCCCGAAGATCTCCAAACGATTGATTTTATCCGCAAAAAAATTGATTTAAGGATTTTGCCCCGTTTGACCACGCCGGCCTCCATAAAAAATATTCTTTTGCAGTACCAGAAAACTCTTAAAGCCGAATTCGGAGATATCATTCAAAAAGAGGCGGTGGAGATAAGGACGATACGAGAGGGTGAGGGGGGGGTCACGGCGGAAAAAGAAGAACTGCAAAAAGTTGCGGAGGATTTGCCCGTGATCCGCATAGTTGACATGTTAATCCGCCACGCCGTTTTGGAGCGGGCTTCCGATATACATATTGAGCCCACGGAAAAAGAAGTCGTGGTTCGTTATCGTATTGACGGTATTCTGCGCGACGCGATGATTCTTCCCAAACAAGTTCATTCCGGCGTTGTCGCCAGGATTAAAGTTTTGTCTAATCTTAAACTGGATGAACACCGTTTGCCGCAGGATGGCCGCTTCAAAGTTGAAACCGAAGATTATAAGTATTCTTTGCGCGTTTCCATTCTGCCGGTTTTTGACGGAGAGAAGATTGTAATGAGATTGTTGCCGGAAACTTCGCAGGCGGTTAGTCTTGAGACCCTTGGGATTAGAAATGAAGCCCTGGAAGCAATACAGCATAACTTGCGAAAACCGGTAGGGATGTTTTTGGTGACGGGACCCACCGGTTCCGGTAAAACCACGACCCTATATTCTCTTTTGGAGATTCTGAATATGCCGGGAGTAAACATTTCTACCGTTGAAGATCCTATTGAATACCGCATTCCACGGATTAATCAAACTCAGGTTAATCCGAAGATTGGTCTTACTTTCGCTAATGGTTTGCGCGCCTTATTGCGTCAGGACCCCAATATGATAATGGTAGGGGAGATACGAGACAACGAAACTGCCGGCCTCGCTATTAACGCGGCTCTCACCGGTCATTTGGTTCTTTCTACTCTGCACACAAATAACGCTGCCGGCGCCATTCCGCGCCTTATTGATATGAAAGCCGAACCGTTTTTAATAGCTTCTACGTTAAACGTCATAGTGGCGCAACGATTAGTTAGGCGGCTTTACGAAAATAAGGCGCAATATCGGCTTTCGGCAGCAGAACTAAAAGACATAGAAAAATACTGCGATGCCGAAAAAATCTTGGACATTCTGCGAAAAGACAAAATTGTTCCGGCTAAGGCCGCCTGGAAAGACATTGTTTTTTATCGCCCTAAACGTTCAAAAGACTGTCCCGAAGGCTACAGGGGGCGAATCGGAATTTACGAGGTGCTAAACATTACGGAAACTATAAAGGCCCTTATTGTAAGAGGCGCGACTTCTGACGAAATTCATGCGCAAGCCGTAAACGACGGAATGAAAACGATGATAGAAGACGGATTTATTAAAGCGGCCCAAGCCGTTACAAGCATAGAAGAGGTTTTAAGGGTAACAATAGAATAA
PROTEIN sequence
Length: 585
MRVESQQLKAFLLETHLITEKKFEKAIKEADESGRKIGDILVAENVVSYEQLLQVEAYILGIPFVNLEKEKVEPDVLKIIPEPIARTHNIVAFRRKGNNLEVAMLDPEDLQTIDFIRKKIDLRILPRLTTPASIKNILLQYQKTLKAEFGDIIQKEAVEIRTIREGEGGVTAEKEELQKVAEDLPVIRIVDMLIRHAVLERASDIHIEPTEKEVVVRYRIDGILRDAMILPKQVHSGVVARIKVLSNLKLDEHRLPQDGRFKVETEDYKYSLRVSILPVFDGEKIVMRLLPETSQAVSLETLGIRNEALEAIQHNLRKPVGMFLVTGPTGSGKTTTLYSLLEILNMPGVNISTVEDPIEYRIPRINQTQVNPKIGLTFANGLRALLRQDPNMIMVGEIRDNETAGLAINAALTGHLVLSTLHTNNAAGAIPRLIDMKAEPFLIASTLNVIVAQRLVRRLYENKAQYRLSAAELKDIEKYCDAEKILDILRKDKIVPAKAAWKDIVFYRPKRSKDCPEGYRGRIGIYEVLNITETIKALIVRGATSDEIHAQAVNDGMKTMIEDGFIKAAQAVTSIEEVLRVTIE*