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gwf2_scaffold_197

Alias: PER_GWF2_39_17_3

Search features with annotation key words

Displaying items 31-60 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_197_31
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


42571..42933
DNA (363bp) protein (121aa)
50S ribosomal protein L31 n=1 Tax=Thermodesulfobacterium sp. (strain OPB45) RepID=F8C357_THESO
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=PER_GWF2_39_17
50S ribosomal protein L31
coiled-coil (db=Coil db_id=coil from=75 to=96 evalue=NA)
gwf2_scaffold_197_32
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

42946..44007
DNA (1062bp) protein (354aa)
Chorismate synthase, chorismate synthase {ECO:0000313|EMBL:KKR08912.1}; EC=4.2.3.5 {ECO:0000313|EMBL:KKR08912.1};; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacte
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PBX1_DEFDS rbh
CHORISMATE_SYNTHASE_1 (db=PatternScan db_id=PS00787 from=16 to=31 evalue=0.0 interpro_id=IPR020541 interpro_description=Chorismate synthase, conserved site GO=Molecular Function: chorismate synthase activity (GO:0004107), Biological Process: aromatic amino acid family biosynthetic process (GO:0009073))
gwf2_scaffold_197_33
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(44018..45994)
DNA (1977bp) protein (659aa)
Cellulosome-anchoring protein n=1 Tax=sediment metagenome RepID=D9PNH4_9ZZZZ
hypothetical protein Tax=PER_GWF2_39_17
amidotransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwf2_scaffold_197_34
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

46076..47212
DNA (1137bp) protein (379aa)
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=PER_GWF2_39_17
Queuine tRNA-ribosyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5G3_CALAS rbh
tgt; queuine tRNA-ribosyltransferase
seg (db=Seg db_id=seg from=311 to=322)
gwf2_scaffold_197_35
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

47245..47823
DNA (579bp) protein (193aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=PER_GWF2_39_17
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Thermincola potens (strain JR) RepID=D5XEH4_THEPJ
Holliday junction DNA helicase RuvA
coiled-coil (db=Coil db_id=coil from=116 to=137 evalue=NA)
gwf2_scaffold_197_36
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

47823..48872
DNA (1050bp) protein (350aa)
aminopeptidase YpdF (EC:3.4.11.-); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=PER_GWF2_39_17
aminopeptidase YpdF (EC:3.4.11.-)
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHE5_9CLOT
seg (db=Seg db_id=seg from=94 to=104)
gwf2_scaffold_197_37
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

48909..50690
DNA (1782bp) protein (594aa)
glucosamine/fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=PER_GWF2_39_17
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CER7_THET1 rbh
glucosamine/fructose-6-phosphate aminotransferase
seg (db=Seg db_id=seg from=404 to=415)
gwf2_scaffold_197_38
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(50703..54692)
DNA (3990bp) protein (1330aa)
Peptidase M4 thermolysin n=2 Tax=Micromonospora RepID=D9TEJ5_MICAI
Peptidase M4 thermolysin Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=773 to=792)
(db=HMMPfam db_id=PF02868 from=251 to=438 evalue=1.5e-14 interpro_id=IPR001570 interpro_description=Peptidase M4, C-terminal GO=Molecular Function: metalloendopeptidase activity (GO:0004222))
gwf2_scaffold_197_39
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

54933..56354
DNA (1422bp) protein (474aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] Tax=PER_GWF2_39_17
Pyk n=1 Tax=Paenibacillus elgii B69 RepID=UPI000248D1A5 rbh
pyruvate kinase
PYRUVATE_KINASE (db=PatternScan db_id=PS00110 from=217 to=229 evalue=0.0 interpro_id=IPR018209 interpro_description=Pyruvate kinase, active site GO=Molecular Function: pyruvate kinase activity (GO:0004743))
gwf2_scaffold_197_40
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

56435..56914
DNA (480bp) protein (160aa)
Crossover junction endodeoxyribonuclease RuvC, crossover junction endodeoxyribonuclease RuvC {ECO:0000313|EMBL:KKR08920.1}; EC=3.1.22.4 {ECO:0000313|EMBL:KKR08920.1};; TaxID=1619067 species="Bacteria;
Crossover junction endodeoxyribonuclease RuvC n=6 Tax=Fusobacterium RepID=E5BDS7_9FUSO
crossover junction endodeoxyribonuclease RuvC
RUVC (db=PatternScan db_id=PS01321 from=113 to=148 evalue=0.0 interpro_id=IPR020563 interpro_description=Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO=Molecular Function: crossover junction endodeoxyribonuclease activity (GO:0008821))
gwf2_scaffold_197_41
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

57000..58463
DNA (1464bp) protein (488aa)
TPR Domain containing protein n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=Q24FG4_TETTS
SLEI family protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
gwf2_scaffold_197_42
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

58473..59225
DNA (753bp) protein (251aa)
Type IV prepilin leader peptidase PilD, leader peptidase (Prepilin peptidase) / N-methyltransferase {ECO:0000313|EMBL:KKR24713.1}; EC=3.4.23.43 {ECO:0000313|EMBL:KKR24713.1};; TaxID=1619064 species="B
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YDY8_DICT6
type IV prepilin leader peptidase PilD
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
gwf2_scaffold_197_43
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

59263..60891
DNA (1629bp) protein (543aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=GPMI_MOOTA rbh
Phosphoglyceromutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000313|EMBL:KKR24714.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacteri
no description (db=Gene3D db_id=G3DSA:3.40.720.10 from=8 to=96 evalue=1.2e-20 interpro_id=IPR017849 interpro_description=Alkaline phosphatase-like, alpha/beta/alpha GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
gwf2_scaffold_197_44
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

60985..62070
DNA (1086bp) protein (362aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=PER_GWF2_39_17
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D179_HALOH rbh
seg (db=Seg db_id=seg from=66 to=80)
gwf2_scaffold_197_45
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(62089..62793)
DNA (705bp) protein (235aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_197_46
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(62811..63557)
DNA (747bp) protein (249aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_197_47
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

63698..64102
DNA (405bp) protein (135aa)
Cupin 2 domain-containing protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F661_CONWI
cupin Tax=PER_GWF2_39_17
cupin
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=18 to=98 evalue=0.00043 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
gwf2_scaffold_197_48
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

64147..67320
DNA (3174bp) protein (1058aa)
Translocase subunit SecD n=1 Tax=Fusobacterium nucleatum subsp. animalis ATCC 51191 RepID=F9ENQ4_FUSNU rbh
protein-export membrane protein SecD; K12257 SecD/SecF fusion protein Tax=PER_GWF2_39_17
protein translocase subunit secF/protein translocase subunit secD
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
gwf2_scaffold_197_49
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

67488..67835
DNA (348bp) protein (116aa)
PROKAR_LIPOPROTEIN Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
gwf2_scaffold_197_50
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(67851..68339)
DNA (489bp) protein (163aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_197_51
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(68466..69671)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) RepID=A2ST23_METLZ
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
gwf2_scaffold_197_52
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(69934..70488)
DNA (555bp) protein (185aa)
Predicted metal-dependent hydrolase n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZL6_9FIRM
Zinc-dependent protease {ECO:0000313|EMBL:KKR25586.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
Predicted metal-dependent hydrolase
(db=HMMPfam db_id=PF01863 from=23 to=76 evalue=8.0e-05 interpro_id=IPR002725 interpro_description=Protein of unknown function DUF45)
gwf2_scaffold_197_53
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(70488..73400)
DNA (2913bp) protein (971aa)
restriction enzyme type I helicase subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=PER_GWF2_39_17
Type I site-specific deoxyribonuclease, HsdR family protein n=4 Tax=Bacillus cereus RepID=D7WJ59_BACCE rbh
hypothetical protein
seg (db=Seg db_id=seg from=940 to=957)
gwf2_scaffold_197_54
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(73400..74248)
DNA (849bp) protein (283aa)
glycyl-tRNA synthetase n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2330
glycyl-tRNA synthetase Tax=PER_GWF2_39_17
protein of unknown function [coiled-coil domain]
seg (db=Seg db_id=seg from=203 to=222)
gwf2_scaffold_197_55
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(74254..75492)
DNA (1239bp) protein (413aa)
type I restriction-modification system specificity subunit (EC:3.1.21.3); K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] Tax=PER_GWF2_39_17
type I restriction-modification system specificity subunit (EC:3.1.21.3)
Type I restriction-modification enzyme, S subunit, EcoA family n=1 Tax=Staphylococcus epidermidis NIHLM015 RepID=J0H958_STAEP
coiled-coil (db=Coil db_id=coil from=177 to=205 evalue=NA)
gwf2_scaffold_197_56
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(75522..75674)
DNA (153bp) protein (51aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_197_57
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(75671..76678)
DNA (1008bp) protein (336aa)
Virulence protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZXA6_ORNRL rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR08937.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
virulence protein
seg (db=Seg db_id=seg from=146 to=157)
gwf2_scaffold_197_58
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(76747..78432)
DNA (1686bp) protein (562aa)
Type I restriction-modification system, M subunit, type I restriction enzyme M protein {ECO:0000313|EMBL:KKR25592.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KKR25592.1};; TaxID=1619064 species="Bacteria; Pereg
Type I restriction-modification system, adenine-specific DNA methylase subunit n=2 Tax=Anoxybacillus flavithermus RepID=M5JGQ5_9BACI rbh
type I restriction-modification protein subunit M
transmembrane_regions (db=TMHMM db_id=tmhmm from=426 to=448)
gwf2_scaffold_197_59
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

78598..78810
DNA (213bp) protein (71aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_197_60
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

79254..79646
DNA (393bp) protein (131aa)
Recombinase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVL3_HIPMA
Recombinase {ECO:0000313|EMBL:KKR08940.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
recombinase
no description (db=Gene3D db_id=G3DSA:3.40.50.1390 from=1 to=94 evalue=1.0e-05 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Displaying items 31-60 of 134 in total

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